RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 SPATC1LQ9H0A9 340 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 NUCKS1Q9H1E3 243 aaKnown RBP11.39□□□□□ -0.59
HDAC9-210ENST00000428307 ANKEF1Q9NU02 776 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 DMAC2Q9NW81 257 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 FHOD1Q9Y613 1164 aa11.39□□□□□ -0.59
HDAC9-210ENST00000428307 SERPING1P05155 500 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 PSAPP07602 524 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 KLHL30Q0D2K2 578 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ASTE1Q2TB18 679 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 TEX35Q5T0J7 233 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 FBXO38Q6PIJ6 1188 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 OTUD6AQ7L8S5 288 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 SMAP1Q8IYB5 467 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ATP6V0A1Q93050 837 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ASCC2Q9H1I8 757 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 TMEM206Q9H813 350 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ADAMTS1Q9UHI8 967 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 RLFQ13129 1914 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 A0A0G2JLL6 359 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 POTEB2H3BUK9 544 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 EIF3JO75822 258 aaKnown RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ATP1A1P05023 1023 aaKnown RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 CBWD6Q4V339 395 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 CBWD3Q5JTY5 395 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 CBWD5Q5RIA9 395 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 PRRT2Q7Z6L0 340 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ZSWIM2Q8NEG5 633 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 RDM1Q8NG50 284 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 GOLGA5Q8TBA6 731 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ZNF526Q8TF50 670 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 SYN2Q92777 582 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 ACCSQ96QU6 501 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 SENP7Q9BQF6 1050 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 MKNK1Q9BUB5 465 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 MLXIPQ9HAP2 919 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 PLCB1Q9NQ66 1216 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 CGNQ9P2M7 1197 aaKnown RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 SEPT9Q9UHD8 586 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-210ENST00000428307 PHIPQ8WWQ0 1821 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 UBE4BO95155 1302 aa11.38□□□□□ -0.59
HDAC9-210ENST00000428307 SSU72P8A0A1W2PR75 194 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 SRGAP2O75044 1071 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 PNMA6AP0CW24 399 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-210ENST00000428307 NPTX2P47972 431 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 FMO5P49326 533 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-210ENST00000428307 DLG4P78352 724 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 ASIC2Q16515 512 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 NFIL3Q16649 462 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 ABHD15Q6UXT9 468 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 ZNF662Q6ZS27 426 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 USP50Q70EL3 339 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-210ENST00000428307 RIOX2Q8IUF8 465 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 SECISBP2LQ93073 1101 aaKnown RBP11.37□□□□□ -0.59
HDAC9-210ENST00000428307 IWS1Q96ST2 819 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 AIPL1Q9NZN9 384 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 AJAP1Q9UKB5 411 aaPredicted RBP11.37□□□□□ -0.59
HDAC9-210ENST00000428307 MYO6Q9UM54 1294 aa11.37□□□□□ -0.59
HDAC9-210ENST00000428307 RBBP6Q7Z6E9 1792 aaKnown RBP11.37□□□□□ -0.59
HDAC9-210ENST00000428307 A0A087X0T9 212 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 GOLGA8IPA6NC78 632 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 GOLGA8JA6NMD2 632 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 STAM2O75886 525 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 STBD1O95210 358 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 LCA5LO95447 670 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 PGK2P07205 417 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 FAM228BP0C875 321 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SMTNP53814 917 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 GTF2BQ00403 316 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 PRKCEQ02156 737 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 PTK2Q05397 1052 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 DMP1Q13316 513 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-210ENST00000428307 MAPK8IP2Q13387 824 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-210ENST00000428307 Q3C1V9 767 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 PROCA1Q8NCQ7 364 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-210ENST00000428307 BSNDQ8WZ55 320 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 OPTNQ96CV9 577 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 TXNRD2Q9NNW7 524 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SIX2Q9NPC8 291 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 FBXO40Q9UH90 709 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 COL11A1P12107 1806 aaPredicted RBP11.36□□□□□ -0.59
HDAC9-210ENST00000428307 NFASCO94856 1347 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SPDYE5A6NIY4 337 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 CXCL11O14625 94 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 MOCS3O95396 460 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 MAPTP10636 758 aaKnown RBP11.36□□□□□ -0.59
HDAC9-210ENST00000428307 CHMP4BP1P59074 171 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 BFSP1Q12934 665 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 MTERF2Q49AM1 385 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 WDR78Q5VTH9 848 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 MIS18BP1Q6P0N0 1132 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 IRF2BP2Q7Z5L9 587 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SRGAP1Q7Z6B7 1085 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SLC9A9Q8IVB4 645 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 EHBP1Q8NDI1 1231 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 TSGA10Q9BZW7 698 aa11.36□□□□□ -0.59
HDAC9-210ENST00000428307 SALL4Q9UJQ4 1053 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms