RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 SLC37A4O43826 429 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 FDPSP14324 419 aaKnown RBP18.19■□□□□ 0.5
DDR1-234ENST00000424544 DARSP14868 501 aaKnown RBP18.19■□□□□ 0.5
DDR1-234ENST00000424544 AK2P54819 239 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 NONOQ15233 471 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDR1-234ENST00000424544 INF2Q27J81 1249 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 MIER3Q7Z3K6 550 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 POF1BQ8WVV4 589 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 MAP7D2Q96T17 732 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 GJB4Q9NTQ9 266 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 TYW1Q9NV66 732 aaKnown RBP18.19■□□□□ 0.5
DDR1-234ENST00000424544 PRKAG3Q9UGI9 489 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 AKT3Q9Y243 479 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 KIAA1671Q9BY89 1806 aa18.19■□□□□ 0.5
DDR1-234ENST00000424544 TBKBP1A7MCY6 615 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 EML1O00423 815 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 GPR37L1O60883 481 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 MAFO75444 373 aaPredicted RBP18.18■□□□□ 0.5
DDR1-234ENST00000424544 MCM2P49736 904 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 CDC42EP1Q00587 391 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 UBE3AQ05086 875 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 PPP2R5CQ13362 524 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 SMAD2Q15796 467 aaKnown RBP18.18■□□□□ 0.5
DDR1-234ENST00000424544 LRRC55Q6ZSA7 311 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 ANO5Q75V66 913 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 ZNF598Q86UK7 904 aaKnown RBP18.18■□□□□ 0.5
DDR1-234ENST00000424544 MSLNLQ96KJ4 702 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 FAM20AQ96MK3 541 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 LRFN3Q9BTN0 628 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 SLKQ9H2G2 1235 aaPredicted RBP18.18■□□□□ 0.5
DDR1-234ENST00000424544 ATP6V0A4Q9HBG4 840 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 DDX25Q9UHL0 483 aaKnown RBP18.18■□□□□ 0.5
DDR1-234ENST00000424544 VAV3Q9UKW4 847 aa18.18■□□□□ 0.5
DDR1-234ENST00000424544 RBM19Q9Y4C8 960 aaKnown RBP18.18■□□□□ 0.5
DDR1-234ENST00000424544 A0A0U1RQF3 1178 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 TMEM150BA6NC51 233 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 LINC01565O15544 149 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 TBX10O75333 385 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 CDKL5O76039 1030 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 EYA4O95677 639 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 ZP2Q05996 745 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 TBC1D8BQ0IIM8 1120 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 ADGRD2Q7Z7M1 963 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 EFHBQ8N7U6 833 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 OXER1Q8TDS5 423 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 HAS1Q92839 578 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 SNX21Q969T3 373 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 TRAIPQ9BWF2 469 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 TMEM117Q9H0C3 514 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 CLEC1BQ9P126 229 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 HCSTQ9UBK5 93 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 PCDHB12Q9Y5F1 795 aa18.17■□□□□ 0.5
DDR1-234ENST00000424544 TBX3O15119 743 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 MBTPS2O43462 519 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 EOMESO95936 686 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 FGFR1P11362 822 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 PSMC5P62195 406 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 EARS2Q5JPH6 523 aaKnown RBP18.16■□□□□ 0.5
DDR1-234ENST00000424544 NEK8Q86SG6 692 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 ECHDC2Q86YB7 292 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 TNFRSF25Q93038 417 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 AAASQ9NRG9 546 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 RAPGEFL1Q9UHV5 662 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
DDR1-234ENST00000424544 FSCN2O14926 492 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 DTNBO60941 627 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 FGF18O76093 207 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 GCFC2P16383 781 aaKnown RBP18.15■□□□□ 0.5
DDR1-234ENST00000424544 ZSCAN20P17040 1043 aaPredicted RBP18.15■□□□□ 0.5
DDR1-234ENST00000424544 ERVFC1P60507 584 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 PLCB3Q01970 1234 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 ME3Q16798 604 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 CSPP1Q1MSJ5 1256 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 MTERF2Q49AM1 385 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 COLGALT1Q8NBJ5 622 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 ZNF668Q96K58 619 aaPredicted RBP18.15■□□□□ 0.5
DDR1-234ENST00000424544 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
DDR1-234ENST00000424544 SH2D3AQ9BRG2 576 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 IGFLR1Q9H665 355 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 WRAP73Q9P2S5 460 aaPredicted RBP18.15■□□□□ 0.5
DDR1-234ENST00000424544 FAM50BQ9Y247 325 aa18.15■□□□□ 0.5
DDR1-234ENST00000424544 TRIOO75962 3097 aa18.14■□□□□ 0.5
DDR1-234ENST00000424544 CCDC194A0A1B0GVG4 234 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 DDX11L8A8MPP1 907 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 HOXA2O43364 376 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
DDR1-234ENST00000424544 QARSP47897 775 aaKnown RBP18.14■□□□□ 0.49
DDR1-234ENST00000424544 SPIRE1Q08AE8 756 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 COASYQ13057 564 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 KCNC3Q14003 757 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 TMEM31Q5JXX7 168 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 CLLU1OSQ5K130 101 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 ADHFE1Q8IWW8 467 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 SEPT9Q9UHD8 586 aaPredicted RBP18.14■□□□□ 0.49
DDR1-234ENST00000424544 LZTS1Q9Y250 596 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 PCDHGC5Q9Y5F6 944 aa18.14■□□□□ 0.49
DDR1-234ENST00000424544 PLXNA4Q9HCM2 1894 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms