RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 GAS2O43903 313 aaKnown RBP29.48■■■□□ 2.31
CDK9-202ENST00000421939 FXR2P51116 673 aaKnown RBP eCLIP29.48■■■□□ 2.31
CDK9-202ENST00000421939 ADGRE1Q14246 886 aa29.48■■■□□ 2.31
CDK9-202ENST00000421939 EMC2Q15006 297 aa29.48■■■□□ 2.31
CDK9-202ENST00000421939 MAFAQ8NHW3 353 aaPredicted RBP29.48■■■□□ 2.31
CDK9-202ENST00000421939 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.48■■■□□ 2.31
CDK9-202ENST00000421939 BMP2KQ9NSY1 1161 aaPredicted RBP29.48■■■□□ 2.31
CDK9-202ENST00000421939 DENND3A2RUS2 1198 aa29.47■■■□□ 2.31
CDK9-202ENST00000421939 LAD1O00515 517 aa29.47■■■□□ 2.31
CDK9-202ENST00000421939 MGEA5O60502 916 aa29.47■■■□□ 2.31
CDK9-202ENST00000421939 SPATA31C1P0DKV0 1188 aa29.47■■■□□ 2.31
CDK9-202ENST00000421939 RHPN2Q8IUC4 686 aa29.47■■■□□ 2.31
CDK9-202ENST00000421939 NPAS4Q8IUM7 802 aa29.47■■■□□ 2.31
CDK9-202ENST00000421939 CCDC43Q96MW1 224 aaKnown RBP29.47■■■□□ 2.31
CDK9-202ENST00000421939 TGS1Q96RS0 853 aaKnown RBP29.47■■■□□ 2.31
CDK9-202ENST00000421939 EPOPA6NHQ4 379 aa29.46■■■□□ 2.31
CDK9-202ENST00000421939 MED24O75448 989 aa29.46■■■□□ 2.31
CDK9-202ENST00000421939 PDCP20941 246 aa29.46■■■□□ 2.31
CDK9-202ENST00000421939 ZNF410Q86VK4 478 aa29.46■■■□□ 2.31
CDK9-202ENST00000421939 CATSPER3Q86XQ3 398 aa29.46■■■□□ 2.31
CDK9-202ENST00000421939 PSPC1Q8WXF1 523 aaKnown RBP29.46■■■□□ 2.31
CDK9-202ENST00000421939 INTS4Q96HW7 963 aaKnown RBP29.46■■■□□ 2.31
CDK9-202ENST00000421939 ADAM2Q99965 735 aa29.46■■■□□ 2.31
CDK9-202ENST00000421939 POLR3CQ9BUI4 534 aaPredicted RBP29.46■■■□□ 2.31
CDK9-202ENST00000421939 GCOM2Q9BZD3 368 aaPredicted RBP29.46■■■□□ 2.31
CDK9-202ENST00000421939 RARRES1P49788 294 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 ERVK-21P61565 698 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 HAUS3Q68CZ6 603 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 PIGOQ8TEQ8 1089 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 TCP11Q8WWU5 503 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 TMEM143Q96AN5 459 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 NLRP4Q96MN2 994 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 MTRQ99707 1265 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 RC3H2Q9HBD1 1191 aaKnown RBP29.45■■■□□ 2.31
CDK9-202ENST00000421939 C1orf112Q9NSG2 853 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 MTUS1Q9ULD2 1270 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 COL4A3BPQ9Y5P4 624 aa29.45■■■□□ 2.31
CDK9-202ENST00000421939 COL4A4P53420 1690 aaPredicted RBP29.44■■■□□ 2.3
CDK9-202ENST00000421939 A0A087WZ62 844 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 VPS37CA5D8V6 355 aaPredicted RBP29.44■■■□□ 2.3
CDK9-202ENST00000421939 STAG3L1P0CL83 205 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 RPA1P27694 616 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 PRPHP41219 470 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 SARSP49591 514 aaKnown RBP29.44■■■□□ 2.3
CDK9-202ENST00000421939 KSR1Q8IVT5 923 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 CRIPAKQ8N1N5 446 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 SNX21Q969T3 373 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 FDXACB1Q9BRP7 624 aaPredicted RBP29.44■■■□□ 2.3
CDK9-202ENST00000421939 RAB34Q9BZG1 259 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 RGS18Q9NS28 235 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 ADGRA3Q8IWK6 1321 aa29.44■■■□□ 2.3
CDK9-202ENST00000421939 RFXAPO00287 272 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 XRCC6P12956 609 aaKnown RBP eCLIP29.43■■■□□ 2.3
CDK9-202ENST00000421939 IGFBP4P22692 258 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 DSC3Q14574 896 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 POTEGQ6S5H5 508 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 SLC24A5Q71RS6 500 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 ATP6V0A4Q9HBG4 840 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 XPNPEP1Q9NQW7 623 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 LRWD1Q9UFC0 647 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 PRUNE2Q8WUY3 3088 aa29.43■■■□□ 2.3
CDK9-202ENST00000421939 DGAT1O75907 488 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 DGKIO75912 1065 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 ATP2C1P98194 919 aaPredicted RBP29.42■■■□□ 2.3
CDK9-202ENST00000421939 BRAPQ7Z569 592 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 IGSF22Q8N9C0 903 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 PRPF31Q8WWY3 499 aaKnown RBP29.42■■■□□ 2.3
CDK9-202ENST00000421939 NACC1Q96RE7 527 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 C17orf80Q9BSJ5 609 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 LRFN2Q9ULH4 789 aa29.42■■■□□ 2.3
CDK9-202ENST00000421939 A0A087WWV3 80 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 C9IYK1 514 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 CSDE1O75534 798 aaKnown RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 IBSPP21815 317 aaPredicted RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 FGFR4P22455 802 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 SFPQP23246 707 aaKnown RBP eCLIP29.41■■■□□ 2.3
CDK9-202ENST00000421939 CCT6AP40227 531 aaKnown RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 LAMTOR4Q0VGL1 99 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 PDIA5Q14554 519 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 DTHD1Q6ZMT9 781 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 ZNF689Q96CS4 500 aaPredicted RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 SAMD11Q96NU1 681 aa29.41■■■□□ 2.3
CDK9-202ENST00000421939 INO80BQ9C086 356 aaPredicted RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 RNF216Q9NWF9 866 aaPredicted RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 DBR1Q9UK59 544 aaKnown RBP29.41■■■□□ 2.3
CDK9-202ENST00000421939 MUTP22033 750 aa29.4■■■□□ 2.3
CDK9-202ENST00000421939 FERMT3Q86UX7 667 aa29.4■■■□□ 2.3
CDK9-202ENST00000421939 FIBCD1Q8N539 461 aa29.4■■■□□ 2.3
CDK9-202ENST00000421939 GDPD5Q8WTR4 605 aa29.4■■■□□ 2.3
CDK9-202ENST00000421939 FOXD4L1Q9NU39 408 aa29.4■■■□□ 2.3
CDK9-202ENST00000421939 STK24Q9Y6E0 443 aa29.4■■■□□ 2.3
CDK9-202ENST00000421939 USO1O60763 962 aaKnown RBP29.39■■■□□ 2.3
CDK9-202ENST00000421939 ZSCAN20P17040 1043 aaPredicted RBP29.39■■■□□ 2.3
CDK9-202ENST00000421939 GRB10Q13322 594 aa29.39■■■□□ 2.3
CDK9-202ENST00000421939 BTG3Q14201 252 aaPredicted RBP29.39■■■□□ 2.3
CDK9-202ENST00000421939 IL17AQ16552 155 aa29.39■■■□□ 2.3
CDK9-202ENST00000421939 HSCBQ8IWL3 235 aa29.39■■■□□ 2.3
CDK9-202ENST00000421939 SNX29Q8TEQ0 813 aa29.39■■■□□ 2.3
CDK9-202ENST00000421939 IFT122Q9HBG6 1241 aa29.39■■■□□ 2.3
CDK9-202ENST00000421939 PCDHB7Q9Y5E2 793 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms