RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 NOGQ13253 232 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 TMCO4Q5TGY1 634 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 CST9Q5W186 159 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 SLFN13Q68D06 897 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 STYK1Q6J9G0 422 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 RTKN2Q8IZC4 609 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 MBD6Q96DN6 1003 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 MASTLQ96GX5 879 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 YIPF4Q9BSR8 244 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF277Q9NRM2 450 aaPredicted RBP6.62□□□□□ -1.35
SFXN1-202ENST00000421887 ZDHHC9Q9Y397 364 aa6.62□□□□□ -1.35
SFXN1-202ENST00000421887 TRAF5O00463 557 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 CBFA2T2O43439 604 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 CELF2O95319 508 aaKnown RBP6.61□□□□□ -1.35
SFXN1-202ENST00000421887 ADAM9Q13443 819 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 AMOTQ4VCS5 1084 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 FBXW10Q5XX13 1052 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF530Q6P9A1 599 aaPredicted RBP6.61□□□□□ -1.35
SFXN1-202ENST00000421887 UNC5AQ6ZN44 842 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 USP50Q70EL3 339 aaPredicted RBP6.61□□□□□ -1.35
SFXN1-202ENST00000421887 MILR1Q7Z6M3 343 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 ADAT2Q7Z6V5 191 aaKnown RBP6.61□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF575Q86XF7 245 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 DNAJC10Q8IXB1 793 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 CNBD1Q8NA66 436 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 Q8TCH9 128 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 YTHDC1Q96MU7 727 aaKnown RBP6.61□□□□□ -1.35
SFXN1-202ENST00000421887 TM9SF2Q99805 663 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 NT5C1AQ9BXI3 368 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF408Q9H9D4 720 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 ZNRF3Q9ULT6 936 aa6.61□□□□□ -1.35
SFXN1-202ENST00000421887 TRBV23OR9-2A0A075B6M9 112 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 PATL2C9JE40 543 aaKnown RBP6.6□□□□□ -1.35
SFXN1-202ENST00000421887 FZD9O00144 591 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 SRGNP10124 158 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 CANXP27824 592 aaKnown RBP6.6□□□□□ -1.35
SFXN1-202ENST00000421887 IARSP41252 1262 aaKnown RBP6.6□□□□□ -1.35
SFXN1-202ENST00000421887 NKX3-2P78367 333 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 FOXE3Q13461 319 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 PRR5LQ6MZQ0 368 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 HS2ST1Q7LGA3 356 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 FBXO33Q7Z6M2 555 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 CTU1Q7Z7A3 348 aaKnown RBP6.6□□□□□ -1.35
SFXN1-202ENST00000421887 TAB3Q8N5C8 712 aaPredicted RBP6.6□□□□□ -1.35
SFXN1-202ENST00000421887 PLEKHO2Q8TD55 490 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 FERD3LQ96RJ6 166 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 GZF1Q9H116 711 aaPredicted RBP6.6□□□□□ -1.35
SFXN1-202ENST00000421887 SAGE1Q9NXZ1 904 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 WHRNQ9P202 907 aa6.6□□□□□ -1.35
SFXN1-202ENST00000421887 SCN11AQ9UI33 1791 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 CYP19A1P11511 503 aaPredicted RBP6.59□□□□□ -1.35
SFXN1-202ENST00000421887 IMPDH2P12268 514 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 AMPD2Q01433 879 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 ABHD18Q0P651 414 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 PKN2Q16513 984 aaKnown RBP6.59□□□□□ -1.35
SFXN1-202ENST00000421887 TBC1D9BQ66K14 1250 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 RUFY4Q6ZNE9 571 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 TEX2Q8IWB9 1127 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 FAM126BQ8IXS8 530 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 SEC14L1Q92503 715 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 CSRNP2Q9H175 543 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 CROTQ9UKG9 612 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 HDAC9Q9UKV0 1011 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 ZNF214Q9UL59 606 aaPredicted RBP6.59□□□□□ -1.35
SFXN1-202ENST00000421887 ZBTB1Q9Y2K1 713 aa6.59□□□□□ -1.35
SFXN1-202ENST00000421887 STARD3NLO95772 234 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 NPR1P16066 1061 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 ALDH1B1P30837 517 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 EPS15P42566 896 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 MLLT6P55198 1093 aaPredicted RBP6.58□□□□□ -1.36
SFXN1-202ENST00000421887 CR1LQ2VPA4 569 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 NRN1LQ496H8 165 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 HS1BP3Q53T59 392 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 IGFL4Q6B9Z1 124 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 PKN3Q6P5Z2 889 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 SYNE4Q8N205 404 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 HAUS7Q99871 368 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 NGRNQ9NPE2 291 aaKnown RBP6.58□□□□□ -1.36
SFXN1-202ENST00000421887 CLEC1BQ9P126 229 aa6.58□□□□□ -1.36
SFXN1-202ENST00000421887 BCORQ6W2J9 1755 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 C22orf46C9J442 243 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 GUCY2CP25092 1073 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 HUNKP57058 714 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 PRKD1Q15139 912 aaPredicted RBP6.57□□□□□ -1.36
SFXN1-202ENST00000421887 HEATR6Q6AI08 1181 aaKnown RBP6.57□□□□□ -1.36
SFXN1-202ENST00000421887 SLC17A8Q8NDX2 589 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 FGD4Q96M96 766 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 CLIC6Q96NY7 704 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 GBP3Q9H0R5 595 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 IKZF4Q9H2S9 585 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 ADARB2Q9NS39 739 aaKnown RBP6.57□□□□□ -1.36
SFXN1-202ENST00000421887 FTSJ1Q9UET6 329 aa6.57□□□□□ -1.36
SFXN1-202ENST00000421887 SCN7AQ01118 1682 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 PPM1BO75688 479 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 ZNF202O95125 648 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 THBDP07204 575 aa6.56□□□□□ -1.36
SFXN1-202ENST00000421887 FXR1P51114 621 aaKnown RBP eCLIP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 MFAP1P55081 439 aaKnown RBP6.56□□□□□ -1.36
SFXN1-202ENST00000421887 EIF4A2Q14240 407 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms