RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 FAM186BQ8IYM0 893 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 ABRAQ8N0Z2 381 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 SYN2Q92777 582 aaPredicted RBP18.41■□□□□ 0.54
SSBP3-205ENST00000417664 BORCS6Q96GS4 357 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 EPN1Q9Y6I3 576 aaPredicted RBP18.41■□□□□ 0.54
SSBP3-205ENST00000417664 CCL15-CCL14A0A0B4J2E2 113 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 PDHXO00330 501 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 NDUFA10O95299 355 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 GTF2F1P35269 517 aaKnown RBP eCLIP18.41■□□□□ 0.542e-6■■■□□ 19.2
SSBP3-205ENST00000417664 CCL15Q16663 113 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 FAM160B1Q5W0V3 765 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 AFAP1L1Q8TED9 768 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 KCNN1Q92952 543 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 FGD4Q96M96 766 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 RRAGCQ9HB90 399 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 ATP6V0A4Q9HBG4 840 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 PLCB1Q9NQ66 1216 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 MORF4L1Q9UBU8 362 aa18.41■□□□□ 0.54
SSBP3-205ENST00000417664 SEPT9Q9UHD8 586 aaPredicted RBP18.41■□□□□ 0.54
SSBP3-205ENST00000417664 MYH9P35579 1960 aaKnown RBP18.4■□□□□ 0.54
SSBP3-205ENST00000417664 TMEM150BA6NC51 233 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 BTBD19C9JJ37 291 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 MAPK13O15264 365 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 STRNO43815 780 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 OATP04181 439 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 PEX3P56589 373 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 KRT83P78385 493 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 SP4Q02446 784 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 TRIM65Q6PJ69 517 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 CACNA2D4Q7Z3S7 1137 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 SEPT1Q8WYJ6 367 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 ZNF592Q92610 1267 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 SLC35C1Q96A29 364 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 CHP1Q99653 195 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 DESI2Q9BSY9 194 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 NIFKQ9BYG3 293 aaKnown RBP18.4■□□□□ 0.54
SSBP3-205ENST00000417664 LRRC37A2A6NM11 1700 aa18.4■□□□□ 0.54
SSBP3-205ENST00000417664 IPO7O95373 1038 aaKnown RBP18.39■□□□□ 0.53
SSBP3-205ENST00000417664 CYP2C8P10632 490 aa18.39■□□□□ 0.53
SSBP3-205ENST00000417664 CASP4P49662 377 aa18.39■□□□□ 0.53
SSBP3-205ENST00000417664 ZNF662Q6ZS27 426 aa18.39■□□□□ 0.53
SSBP3-205ENST00000417664 NRBP2Q9NSY0 501 aa18.39■□□□□ 0.53
SSBP3-205ENST00000417664 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
SSBP3-205ENST00000417664 FBXL5Q9UKA1 691 aa18.39■□□□□ 0.53
SSBP3-205ENST00000417664 ARID2Q68CP9 1835 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 SOCS7O14512 581 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
SSBP3-205ENST00000417664 PGK2P07205 417 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 NPTX2P47972 431 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 EXOC3L4Q17RC7 722 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 WDR78Q5VTH9 848 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 SPRYD7Q5W111 196 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 SYT10Q6XYQ8 523 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 TMEM161BQ8NDZ6 487 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 BRI3BPQ8WY22 251 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 BAP1Q92560 729 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 FAM167AQ96KS9 214 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 IFT74Q96LB3 600 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 MLXIPQ9HAP2 919 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 GPRC5CQ9NQ84 441 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 KMT5AQ9NQR1 393 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 MYO6Q9UM54 1294 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 DAAM1Q9Y4D1 1078 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 DOCK5Q9H7D0 1870 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 UQCRHLA0A096LP55 91 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 GSTTP1A0A1W2PQM5 241 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 EIF3CLB5ME19 914 aaKnown RBP18.38■□□□□ 0.53
SSBP3-205ENST00000417664 EPHB6O15197 1021 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 SLC16A4O15374 487 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 EXOC3O60645 756 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 GGPS1O95749 300 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 UQCRHP07919 91 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 PDXDC1Q6P996 788 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 GBP6Q6ZN66 633 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 MAP4K3Q8IVH8 894 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 EXOC8Q8IYI6 725 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 PARK7Q99497 189 aaKnown RBP18.38■□□□□ 0.53
SSBP3-205ENST00000417664 EIF3CQ99613 913 aaKnown RBP18.38■□□□□ 0.53
SSBP3-205ENST00000417664 SH2D3AQ9BRG2 576 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 LSM14BQ9BX40 385 aaKnown RBP18.38■□□□□ 0.53
SSBP3-205ENST00000417664 NHEJ1Q9H9Q4 299 aaPredicted RBP18.38■□□□□ 0.53
SSBP3-205ENST00000417664 MYO1AQ9UBC5 1043 aa18.38■□□□□ 0.53
SSBP3-205ENST00000417664 CCDC169A6NNP5 214 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 RIOK3O14730 519 aaKnown RBP18.37■□□□□ 0.53
SSBP3-205ENST00000417664 NOL4O94818 638 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 RFC5P40937 340 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 STAT5BP51692 787 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 ARHGAP29Q52LW3 1261 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 DCAF17Q5H9S7 520 aaPredicted RBP18.37■□□□□ 0.53
SSBP3-205ENST00000417664 CELF3Q5SZQ8 465 aaKnown RBP18.37■□□□□ 0.53
SSBP3-205ENST00000417664 TCERG1LQ5VWI1 586 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 INTS8Q75QN2 995 aaKnown RBP18.37■□□□□ 0.53
SSBP3-205ENST00000417664 RRAGAQ7L523 313 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
SSBP3-205ENST00000417664 ZNF467Q7Z7K2 595 aaPredicted RBP18.37■□□□□ 0.53
SSBP3-205ENST00000417664 CCDC155Q8N6L0 562 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 PORCNQ9H237 461 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 DHX33Q9H6R0 707 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms