RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 BFSP2Q13515 415 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 POSTNQ15063 836 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 NFKBIBQ15653 356 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 E2F4Q16254 413 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 TMEM132AQ24JP5 1023 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 TRIM60Q495X7 471 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 IER5Q5VY09 327 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 GRAMD1CQ8IYS0 662 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 MYCT1Q8N699 235 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 DEPTORQ8TB45 409 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 SMARCE1Q969G3 411 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 TMEM143Q96AN5 459 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 NLRP4Q96MN2 994 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 PPP1R16BQ96T49 567 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 RUSC1Q9BVN2 902 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 BLZF1Q9H2G9 400 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 DHX33Q9H6R0 707 aaKnown RBP9.38□□□□□ -0.91
TRIM48-201ENST00000417545 TRMT13Q9NUP7 481 aaKnown RBP9.38□□□□□ -0.91
TRIM48-201ENST00000417545 LARSQ9P2J5 1176 aaKnown RBP9.38□□□□□ -0.91
TRIM48-201ENST00000417545 ODF2LQ9ULJ1 636 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 GINS2Q9Y248 185 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 PCDHA2Q9Y5H9 948 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
TRIM48-201ENST00000417545 NPHP3-ACAD11A0A0J9YXS1 232 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 CCDC169A6NNP5 214 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 B4GALT4O60513 344 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 VTNP04004 478 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 CTSHP09668 335 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 COL6A1P12109 1028 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 GAP43P17677 238 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 GUCY2CP25092 1073 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 THPOP40225 353 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 SMTNP53814 917 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 ZNF200P98182 395 aaPredicted RBP9.37□□□□□ -0.91
TRIM48-201ENST00000417545 CDC42EP1Q00587 391 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 TMEM62Q0P6H9 643 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 MXD4Q14582 209 aaPredicted RBP9.37□□□□□ -0.91
TRIM48-201ENST00000417545 TARBP2Q15633 366 aaKnown RBP9.37□□□□□ -0.91
TRIM48-201ENST00000417545 CAMK4Q16566 473 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 NAALADL2Q58DX5 795 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 L1TD1Q5T7N2 865 aaKnown RBP9.37□□□□□ -0.91
TRIM48-201ENST00000417545 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 ZBTB8OSQ8IWT0 167 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 ENGASEQ8NFI3 743 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 DNAJB3Q8WWF6 145 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 ZBTB10Q96DT7 871 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 PAGE5Q96GU1 130 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 REEP2Q9BRK0 252 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 TRPV6Q9H1D0 765 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 PARVGQ9HBI0 331 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 TMEM39AQ9NV64 488 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 PANK4Q9NVE7 773 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 KBTBD4Q9NVX7 518 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 RMND1Q9NWS8 449 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 KCNG1Q9UIX4 513 aa9.37□□□□□ -0.91
TRIM48-201ENST00000417545 MBLAC1A4D2B0 266 aaPredicted RBP9.36□□□□□ -0.91
TRIM48-201ENST00000417545 MYMKA6NI61 221 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 ZBTB42B2RXF5 422 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 H0YCG3 227 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 K7ENM7 598 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 ASAP2O43150 1006 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CLTBP09497 229 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 SRGAP2CP0DJJ0 459 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 PHKA2P46019 1235 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 PEX3P56589 373 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 TLE2Q04725 743 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 PNOCQ13519 176 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 SNW1Q13573 536 aaKnown RBP9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CUL4BQ13620 913 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 LRRC26Q2I0M4 334 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 HERC4Q5GLZ8 1057 aaPredicted RBP9.36□□□□□ -0.91
TRIM48-201ENST00000417545 ODR4Q5SWX8 454 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CCDC183Q5T5S1 534 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CAVIN1Q6NZI2 390 aaKnown RBP9.36□□□□□ -0.91
TRIM48-201ENST00000417545 RUFY4Q6ZNE9 571 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 C1orf186Q6ZWK4 172 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 SERINC5Q86VE9 423 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 FAM178BQ8IXR5 827 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 FAM126BQ8IXS8 530 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 NME8Q8N427 588 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CAGE1Q8TC20 777 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 GPT2Q8TD30 523 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 PRPF31Q8WWY3 499 aaKnown RBP9.36□□□□□ -0.91
TRIM48-201ENST00000417545 DPF3Q92784 378 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 C7orf25Q9BPX7 421 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 PPP1R12CQ9BZL4 782 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 TRIM9Q9C026 710 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 C2orf40Q9H1Z8 148 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CLSTN2Q9H4D0 955 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 GPRC5CQ9NQ84 441 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 KMT5AQ9NQR1 393 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 TRPV2Q9Y5S1 764 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 GRIN2DO15399 1336 aa9.36□□□□□ -0.91
TRIM48-201ENST00000417545 CENPFP49454 3210 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 KIAA0100Q14667 2235 aaKnown RBP9.35□□□□□ -0.91
TRIM48-201ENST00000417545 SFI1A8K8P3 1242 aa9.35□□□□□ -0.91
TRIM48-201ENST00000417545 EVI5O60447 810 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms