RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 SEPT9Q9UHD8 586 aaPredicted RBP7.14□□□□□ -1.27
USP54-202ENST00000413442 LRFN2Q9ULH4 789 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 ST3GAL5Q9UNP4 418 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 AKT3Q9Y243 479 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 TELO2Q9Y4R8 837 aa7.14□□□□□ -1.27
USP54-202ENST00000413442 A0A0U1RQF3 1178 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 LINC01553A4QN01 128 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 C9IYK1 514 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 H3BNC9 293 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 EML1O00423 815 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 CHMP2AO43633 222 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 CTSHP09668 335 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 ABCD1P33897 745 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 MCM7P33993 719 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 BMPR1AP36894 532 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 PBX2P40425 430 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 GPC3P51654 580 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 POLGP54098 1239 aaPredicted RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 DEFB103AP81534 67 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 UBE3AQ05086 875 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 ST3GAL1Q11201 340 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 BMS1Q14692 1282 aaKnown RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 PPP2R5AQ15172 486 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 MTERF2Q49AM1 385 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 XKR9Q5GH70 373 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 TTC38Q5R3I4 469 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 NCAPH2Q6IBW4 605 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 DTHD1Q6ZMT9 781 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.13□□□□□ -1.27
USP54-202ENST00000413442 Q7L0L9 218 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 TPH2Q8IWU9 490 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 IGSF22Q8N9C0 903 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 SLC17A8Q8NDX2 589 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 PPP1R13LQ8WUF5 828 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 PPP2R3CQ969Q6 453 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 PGBD4Q96DM1 585 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 CCDC51Q96ER9 411 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 CCDC43Q96MW1 224 aaKnown RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 LXNQ9BS40 222 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 C11orf84Q9BUA3 381 aaPredicted RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 AGO3Q9H9G7 860 aaKnown RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 ATP6V0A4Q9HBG4 840 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 GJB4Q9NTQ9 266 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 KCND2Q9NZV8 630 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 KANSL3Q9P2N6 904 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 LRWD1Q9UFC0 647 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 YBX2Q9Y2T7 364 aaKnown RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 MORC2Q9Y6X9 1032 aaPredicted RBP7.13□□□□□ -1.27
USP54-202ENST00000413442 SIP14410 1827 aa7.13□□□□□ -1.27
USP54-202ENST00000413442 ZMYM2Q9UBW7 1377 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 PTPRSQ13332 1948 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 GJB2P29033 226 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 CD52P31358 61 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 TECP42680 631 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 EFNA5P52803 228 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 RABGGTBP53611 331 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 PTGDRQ13258 359 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 BTG3Q14201 252 aaPredicted RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 DSC3Q14574 896 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 PUS10Q3MIT2 529 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 EARS2Q5JPH6 523 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 KRT79Q5XKE5 535 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 APBB1IPQ7Z5R6 666 aaPredicted RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 RTN4RL1Q86UN2 441 aaPredicted RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 CATSPER3Q86XQ3 398 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 TMEM192Q8IY95 271 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 HACE1Q8IYU2 909 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 C4orf32Q8N8J7 132 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 BANK1Q8NDB2 785 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 FBXO22Q8NEZ5 403 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 MAFAQ8NHW3 353 aaPredicted RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 TRAPPC12Q8WVT3 735 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 PRPF31Q8WWY3 499 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 NLRP7Q8WX94 980 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 MYLIPQ8WY64 445 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 DYDC2Q96IM9 177 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 PRIMPOLQ96LW4 560 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 MTRQ99707 1265 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 ADAM2Q99965 735 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 MRPL9Q9BYD2 267 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 TMEM117Q9H0C3 514 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 C2orf40Q9H1Z8 148 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 PRDM12Q9H4Q4 367 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 PUF60Q9UHX1 559 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 DNM3Q9UQ16 869 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 NOC2LQ9Y3T9 749 aaKnown RBP7.12□□□□□ -1.27
USP54-202ENST00000413442 PCDHB12Q9Y5F1 795 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 COL4A3BPQ9Y5P4 624 aa7.12□□□□□ -1.27
USP54-202ENST00000413442 ADGRA3Q8IWK6 1321 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 CNTNAP2Q9UHC6 1331 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 UPP2O95045 317 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 VTNP04004 478 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 SPATA31C1P0DKV0 1188 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 CYP11B2P19099 503 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 PPM1AP35813 382 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 PHKA2P46019 1235 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 RARRES1P49788 294 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 PTENP60484 403 aa7.11□□□□□ -1.27
USP54-202ENST00000413442 ATP2C1P98194 919 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms