RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 POLGP54098 1239 aaPredicted RBP21.06■□□□□ 0.96
TRIM56-202ENST00000412507 ERVK-21P61565 698 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 RHPN2Q8IUC4 686 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 C4orf32Q8N8J7 132 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 SLC7A3Q8WY07 619 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 DHX33Q9H6R0 707 aaKnown RBP21.06■□□□□ 0.96
TRIM56-202ENST00000412507 PPME1Q9Y570 386 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 PRUNE2Q8WUY3 3088 aa21.06■□□□□ 0.96
TRIM56-202ENST00000412507 DENND3A2RUS2 1198 aa21.05■□□□□ 0.96
TRIM56-202ENST00000412507 LYPLA2O95372 231 aa21.05■□□□□ 0.96
TRIM56-202ENST00000412507 DARSP14868 501 aaKnown RBP21.05■□□□□ 0.96
TRIM56-202ENST00000412507 RFC5P40937 340 aa21.05■□□□□ 0.96
TRIM56-202ENST00000412507 LARP1BQ659C4 914 aaKnown RBP21.05■□□□□ 0.96
TRIM56-202ENST00000412507 PPM1EQ8WY54 764 aa21.05■□□□□ 0.96
TRIM56-202ENST00000412507 ADAM2Q99965 735 aa21.05■□□□□ 0.96
TRIM56-202ENST00000412507 C17orf80Q9BSJ5 609 aa21.05■□□□□ 0.96
TRIM56-202ENST00000412507 A0A087WWV3 80 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 A0A087WZ62 844 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 CSDE1O75534 798 aaKnown RBP21.04■□□□□ 0.96
TRIM56-202ENST00000412507 SPATA31C1P0DKV0 1188 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 FGFR4P22455 802 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 PTGDRQ13258 359 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 NPAS4Q8IUM7 802 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 KSR1Q8IVT5 923 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 EXOC8Q8IYI6 725 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 CRIPAKQ8N1N5 446 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 TMEM143Q96AN5 459 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 FDXACB1Q9BRP7 624 aaPredicted RBP21.04■□□□□ 0.96
TRIM56-202ENST00000412507 RC3H2Q9HBD1 1191 aaKnown RBP21.04■□□□□ 0.96
TRIM56-202ENST00000412507 RGS18Q9NS28 235 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 MYH11P35749 1972 aa21.04■□□□□ 0.96
TRIM56-202ENST00000412507 MYO7AQ13402 2215 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 MED24O75448 989 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 DGKIO75912 1065 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 STAG3L1P0CL83 205 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 SARSP49591 514 aaKnown RBP21.03■□□□□ 0.96
TRIM56-202ENST00000412507 CDC42EP1Q00587 391 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 GRB10Q13322 594 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 DSC3Q14574 896 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 EMC2Q15006 297 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 FAM43BQ6ZT52 329 aaPredicted RBP21.03■□□□□ 0.96
TRIM56-202ENST00000412507 CATSPER3Q86XQ3 398 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 FIBCD1Q8N539 461 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 SLC17A8Q8NDX2 589 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 PIGOQ8TEQ8 1089 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 GDPD5Q8WTR4 605 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 ZNF689Q96CS4 500 aaPredicted RBP21.03■□□□□ 0.96
TRIM56-202ENST00000412507 GCOM2Q9BZD3 368 aaPredicted RBP21.03■□□□□ 0.96
TRIM56-202ENST00000412507 TUFT1Q9NNX1 390 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.03■□□□□ 0.96
TRIM56-202ENST00000412507 ANKEF1Q9NU02 776 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 LRFN2Q9ULH4 789 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 COL4A3BPQ9Y5P4 624 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 MYH15Q9Y2K3 1946 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 ADGRA3Q8IWK6 1321 aa21.03■□□□□ 0.96
TRIM56-202ENST00000412507 C9IYK1 514 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 LPXNO60711 386 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 CCDC85BQ15834 202 aaPredicted RBP21.02■□□□□ 0.96
TRIM56-202ENST00000412507 RILPL1Q5EBL4 403 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 ZNF410Q86VK4 478 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 MICALL1Q8N3F8 863 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 ERMNQ8TAM6 284 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 NLRP4Q96MN2 994 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 CCDC43Q96MW1 224 aaKnown RBP21.02■□□□□ 0.96
TRIM56-202ENST00000412507 MTRQ99707 1265 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 POLR3CQ9BUI4 534 aaPredicted RBP21.02■□□□□ 0.96
TRIM56-202ENST00000412507 C1orf112Q9NSG2 853 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 PLXNA4Q9HCM2 1894 aa21.02■□□□□ 0.96
TRIM56-202ENST00000412507 FXR2P51116 673 aaKnown RBP eCLIP21.01■□□□□ 0.957e-7■■■■□ 22.9
TRIM56-202ENST00000412507 BTG3Q14201 252 aaPredicted RBP21.01■□□□□ 0.95
TRIM56-202ENST00000412507 SLC24A5Q71RS6 500 aa21.01■□□□□ 0.95
TRIM56-202ENST00000412507 FBXO22Q8NEZ5 403 aa21.01■□□□□ 0.95
TRIM56-202ENST00000412507 PRPF31Q8WWY3 499 aaKnown RBP21.01■□□□□ 0.95
TRIM56-202ENST00000412507 PSPC1Q8WXF1 523 aaKnown RBP21.01■□□□□ 0.95
TRIM56-202ENST00000412507 XPNPEP1Q9NQW7 623 aa21.01■□□□□ 0.95
TRIM56-202ENST00000412507 PCDHB7Q9Y5E2 793 aa21.01■□□□□ 0.95
TRIM56-202ENST00000412507 MTCH2Q9Y6C9 303 aa21.01■□□□□ 0.95
TRIM56-202ENST00000412507 GTPBP6O43824 516 aaPredicted RBP21■□□□□ 0.95
TRIM56-202ENST00000412507 GAS2O43903 313 aaKnown RBP21■□□□□ 0.95
TRIM56-202ENST00000412507 XRCC6P12956 609 aaKnown RBP eCLIP21■□□□□ 0.95
TRIM56-202ENST00000412507 ZSCAN20P17040 1043 aaPredicted RBP21■□□□□ 0.95
TRIM56-202ENST00000412507 POU3F3P20264 500 aaPredicted RBP21■□□□□ 0.95
TRIM56-202ENST00000412507 RPA1P27694 616 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 RARRES1P49788 294 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 GATMP50440 423 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 LAMTOR4Q0VGL1 99 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 PAN2Q504Q3 1202 aaKnown RBP21■□□□□ 0.95
TRIM56-202ENST00000412507 EPC2Q52LR7 807 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 POTEGQ6S5H5 508 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 TMEM192Q8IY95 271 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 TCP11Q8WWU5 503 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 SAMD11Q96NU1 681 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 LRWD1Q9UFC0 647 aa21■□□□□ 0.95
TRIM56-202ENST00000412507 K7ELQ4 463 aaPredicted RBP20.99■□□□□ 0.95
TRIM56-202ENST00000412507 LAD1O00515 517 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 DGAT1O75907 488 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 SRGAP2CP0DJJ0 459 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 FERMT3Q86UX7 667 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 NACC1Q96RE7 527 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 INO80BQ9C086 356 aaPredicted RBP20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms