RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 MCPH1Q8NEM0 835 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 PSPC1Q8WXF1 523 aaKnown RBP17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 CHAMP1Q96JM3 812 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 SPATA32Q96LK8 384 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 OSBPL7Q9BZF2 842 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 CCDC39Q9UFE4 941 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 PCDHA7Q9UN72 937 aa17.17■□□□□ 0.34
TRAPPC12-203ENST00000411973 USO1O60763 962 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 FGBP02675 491 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 PLCG1P19174 1290 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 NCLP19338 710 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 ARL2P36404 184 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 ME1P48163 572 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 RASIP1Q5U651 963 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 CNKSR3Q6P9H4 555 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 TSHZ1Q6ZSZ6 1077 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 FAM43BQ6ZT52 329 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 ZNF410Q86VK4 478 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 TDHQ8IZJ6 230 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 SYT2Q8N9I0 419 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 LRRC15Q8TF66 581 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 PRPF31Q8WWY3 499 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 IPO9Q96P70 1041 aaKnown RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 PLIN2Q99541 437 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 CDHR5Q9HBB8 845 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 BMP2KQ9NSY1 1161 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 BLOC1S4Q9NUP1 217 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 COLQQ9Y215 455 aaPredicted RBP17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 COL4A3BPQ9Y5P4 624 aa17.16■□□□□ 0.34
TRAPPC12-203ENST00000411973 PLA2G4BP0C869 781 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 GHRP10912 638 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 ACTN1P12814 892 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 SLC12A3P55017 1021 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 LAMTOR4Q0VGL1 99 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 MXD4Q14582 209 aaPredicted RBP17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 SHHQ15465 462 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 C9orf50Q5SZB4 431 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 C1orf186Q6ZWK4 172 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 RHPN2Q8IUC4 686 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 TMEM40Q8WWA1 233 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 HERVK_113Q902F9 699 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 SEPT8Q92599 483 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 APBB2Q92870 758 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 KCND2Q9NZV8 630 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 GINS2Q9Y248 185 aa17.15■□□□□ 0.34
TRAPPC12-203ENST00000411973 MICAL3Q7RTP6 2002 aa17.14■□□□□ 0.34
TRAPPC12-203ENST00000411973 LAMA3Q16787 3333 aa17.14■□□□□ 0.34
TRAPPC12-203ENST00000411973 BAIAP3O94812 1187 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 EIF4BP23588 611 aaKnown RBP17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 POU5F1BQ06416 359 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 ADALQ6DHV7 355 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 RINT1Q6NUQ1 792 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 CCDC73Q6ZRK6 1079 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 KSR1Q8IVT5 923 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 DBF4BQ8NFT6 615 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 NLRP7Q8WX94 980 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 RAD54LQ92698 747 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 OSMRQ99650 979 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 TIPINQ9BVW5 301 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 AGO3Q9H9G7 860 aaKnown RBP17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 STK17AQ9UEE5 414 aa17.14■□□□□ 0.33
TRAPPC12-203ENST00000411973 A0A087WZ62 844 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 ABHD14A-ACY1A0A1B0GW23 586 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 EFCAB14O75071 495 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 RPS6KA5O75582 802 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 DARSP14868 501 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 GLRA2P23416 452 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 GUCY2CP25092 1073 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 CD52P31358 61 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 IKBKEQ14164 716 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 TCTN1Q2MV58 587 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 NAALADL2Q58DX5 795 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 ODR4Q5SWX8 454 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 RRAGBQ5VZM2 374 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 RESP18Q5W5W9 173 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 OTOP2Q7RTS6 562 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 LARP4BQ92615 738 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 PPP1R16BQ96T49 567 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 FDXACB1Q9BRP7 624 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 RUSC1Q9BVN2 902 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 GCOM2Q9BZD3 368 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 POLR3FQ9H1D9 316 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 MTIF3Q9H2K0 278 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 IFT122Q9HBG6 1241 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 NOC2LQ9Y3T9 749 aaKnown RBP17.13■□□□□ 0.33
TRAPPC12-203ENST00000411973 MYH11P35749 1972 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 A0A087X0B3 334 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 CMA1P23946 247 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 PAK2Q13177 524 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 FAM102BQ5T8I3 360 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 IFNLR1Q8IU57 520 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 RNF149Q8NC42 400 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 KIFAP3Q92845 792 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms