RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 RPAINQ86UA6 219 aa20.66■□□□□ 0.9
CDC42-204ENST00000411827 RSPH3Q86UC2 560 aa20.66■□□□□ 0.9
CDC42-204ENST00000411827 OLFML3Q9NRN5 406 aa20.66■□□□□ 0.9
CDC42-204ENST00000411827 EXOC1Q9NV70 894 aa20.66■□□□□ 0.9
CDC42-204ENST00000411827 PANK4Q9NVE7 773 aa20.66■□□□□ 0.9
CDC42-204ENST00000411827 PCDHA5Q9Y5H7 936 aa20.66■□□□□ 0.9
CDC42-204ENST00000411827 HIP1RO75146 1068 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 CAND2O75155 1236 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 RHOBTB3O94955 611 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 KIF20AO95235 890 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 PLS3P13797 630 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 IDEP14735 1019 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 ARL2P36404 184 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 CHMP4BP1P59074 171 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 IGBP1P78318 339 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 ALCAMQ13740 583 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 TFDP1Q14186 410 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 FAM47CQ5HY64 1035 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 MARCH8Q5T0T0 291 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 FAM102BQ5T8I3 360 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 EFCAB12Q6NXP0 572 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 DYMQ7RTS9 669 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 METTL13Q8N6R0 699 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 SPIRE2Q8WWL2 714 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 STAMQ92783 540 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 NTPCRQ9BSD7 190 aaKnown RBP20.65■□□□□ 0.9
CDC42-204ENST00000411827 XPNPEP1Q9NQW7 623 aa20.65■□□□□ 0.9
CDC42-204ENST00000411827 COL6A1P12109 1028 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 DMP1Q13316 513 aaPredicted RBP20.64■□□□□ 0.89
CDC42-204ENST00000411827 HERC4Q5GLZ8 1057 aaPredicted RBP20.64■□□□□ 0.89
CDC42-204ENST00000411827 FAM43BQ6ZT52 329 aaPredicted RBP20.64■□□□□ 0.89
CDC42-204ENST00000411827 NECAB2Q7Z6G3 386 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 GRAMD1CQ8IYS0 662 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 LINC01465Q8N7H1 131 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 KCNN1Q92952 543 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 BLZF1Q9H2G9 400 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 SUGCTQ9HAC7 445 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 CENPFP49454 3210 aa20.64■□□□□ 0.89
CDC42-204ENST00000411827 KAT6AQ92794 2004 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 GRIN2DO15399 1336 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 CYP2C9P11712 490 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 CDK7P50613 346 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 MAPK7Q13164 816 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 PTK7Q13308 1070 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 CT47A1Q5JQC4 288 aaPredicted RBP20.63■□□□□ 0.89
CDC42-204ENST00000411827 ODR4Q5SWX8 454 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 SASS6Q6UVJ0 657 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 SERINC5Q86VE9 423 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 MYCT1Q8N699 235 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 TOX2Q96NM4 488 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 SH2D3AQ9BRG2 576 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 SUCLA2Q9P2R7 463 aaPredicted RBP20.63■□□□□ 0.89
CDC42-204ENST00000411827 NOD1Q9Y239 953 aa20.63■□□□□ 0.89
CDC42-204ENST00000411827 TLR3O15455 904 aaKnown RBP20.62■□□□□ 0.89
CDC42-204ENST00000411827 KLRC4O43908 158 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 PRR29P0C7W0 189 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 NAMPTP43490 491 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 EFNA5P52803 228 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 EHHADHQ08426 723 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 PTGISQ16647 500 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 KMT5BQ4FZB7 885 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 ZNF410Q86VK4 478 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 DAW1Q8N136 415 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 CCDC155Q8N6L0 562 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 TRAPPC12Q8WVT3 735 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 HVCN1Q96D96 273 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 NFKBIZQ9BYH8 718 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 SENP6Q9GZR1 1112 aaPredicted RBP20.62■□□□□ 0.89
CDC42-204ENST00000411827 POLR3FQ9H1D9 316 aaPredicted RBP20.62■□□□□ 0.89
CDC42-204ENST00000411827 C2orf40Q9H1Z8 148 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 ZHX3Q9H4I2 956 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 C11orf49Q9H6J7 331 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 DACH1Q9UI36 760 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 PCDHB13Q9Y5F0 798 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 ARID2Q68CP9 1835 aa20.62■□□□□ 0.89
CDC42-204ENST00000411827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.61■□□□□ 0.89
CDC42-204ENST00000411827 CAVIN2O95810 425 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 MNX1P50219 401 aaPredicted RBP20.61■□□□□ 0.89
CDC42-204ENST00000411827 RAD51AP2Q09MP3 1159 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 COASYQ13057 564 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 SNX17Q15036 470 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 PCBP1Q15365 356 aaKnown RBP eCLIP20.61■□□□□ 0.89
CDC42-204ENST00000411827 COBLL1Q53SF7 1204 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 FAM26FQ5R3K3 315 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 ZNF658Q5TYW1 1059 aaPredicted RBP20.61■□□□□ 0.89
CDC42-204ENST00000411827 GDF6Q6KF10 455 aaPredicted RBP20.61■□□□□ 0.89
CDC42-204ENST00000411827 SLC39A5Q6ZMH5 540 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 ANKRD33Q7Z3H0 272 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 FAM178BQ8IXR5 827 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 KIAA0319LQ8IZA0 1049 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 MLKLQ8NB16 471 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 PRPF31Q8WWY3 499 aaKnown RBP20.61■□□□□ 0.89
CDC42-204ENST00000411827 TMEM143Q96AN5 459 aa20.61■□□□□ 0.89
CDC42-204ENST00000411827 NPHP3-ACAD11A0A0J9YXS1 232 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 M0QZ92 97 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 TREHO43280 583 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 CCDC192P0DO97 292 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 STIM1Q13586 685 aa20.6■□□□□ 0.89
CDC42-204ENST00000411827 MORC3Q14149 939 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms