RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 RGS18Q9NS28 235 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 TBC1D22BQ9NU19 505 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 NAP1L2Q9ULW6 460 aaPredicted RBP10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 GINS2Q9Y248 185 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 NOC2LQ9Y3T9 749 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 PCDHB7Q9Y5E2 793 aa10.41□□□□□ -0.74
NIF3L1-203ENST00000409129 ESYT2A0FGR8 921 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ZBTB42B2RXF5 422 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 GPR182O15218 404 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 MGEA5O60502 916 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ATP4AP20648 1035 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 NBL1P41271 181 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 NDUFV1P49821 464 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 METAP2P50579 478 aaKnown RBP eCLIP10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 CENPQQ7L2Z9 268 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ADGRD2Q7Z7M1 963 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 POF1BQ8WVV4 589 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 RMDN1Q96DB5 314 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 RPGRIP1Q96KN7 1286 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ADAM2Q99965 735 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ZNF577Q9BSK1 485 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ZMYND12Q9H0C1 365 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 C6orf50Q9HD87 102 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 C1orf112Q9NSG2 853 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 CLEC1BQ9P126 229 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 ST3GAL5Q9UNP4 418 aa10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 MAFBQ9Y5Q3 323 aaPredicted RBP10.4□□□□□ -0.74
NIF3L1-203ENST00000409129 DENND3A2RUS2 1198 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 ADAMTS3O15072 1205 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 PRPF3O43395 683 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 PPFIA3O75145 1194 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 CDC45O75419 566 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 C22orf31O95567 290 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 EYA4O95677 639 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 PSAPP07602 524 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 CPA1P15085 419 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 IBSPP21815 317 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 SP100P23497 879 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 CRYBB1P53674 252 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 FAM189BP81408 668 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 RBM10P98175 930 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 SETQ01105 290 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 APOBRQ0VD83 1088 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 CBX2Q14781 532 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 SPOUT1Q5T280 376 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 FAM102BQ5T8I3 360 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 ZNF746Q6NUN9 644 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 Q6ZUG5 572 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 SLC24A5Q71RS6 500 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 CKAP2LQ8IYA6 745 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 SMAP1Q8IYB5 467 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 EFHBQ8N7U6 833 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 TMEM105Q8N8V8 129 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 CCDC12Q8WUD4 166 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 TMEM40Q8WWA1 233 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 KCNB2Q92953 911 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 AAASQ9NRG9 546 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 WDR70Q9NW82 654 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 BARX2Q9UMQ3 279 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 USP15Q9Y4E8 981 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 PCDHB12Q9Y5F1 795 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 PCDHGC5Q9Y5F6 944 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 PCDHA10Q9Y5I2 948 aa10.39□□□□□ -0.75
NIF3L1-203ENST00000409129 FANCMQ8IYD8 2048 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 TBKBP1A7MCY6 615 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 C9IYK1 514 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 GPR32O75388 356 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 GLP2RO95838 553 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 VTNP04004 478 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 GNA11P29992 359 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 CIITAP33076 1130 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 NRIP1P48552 1158 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 UBE3AQ05086 875 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 KIZQ2M2Z5 673 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 TRMT1LQ7Z2T5 733 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 RBM23Q86U06 439 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 FAM228AQ86W67 206 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 REXO1Q8N1G1 1221 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 METTL13Q8N6R0 699 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 SMRP1Q8NCR6 262 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 BRF1Q92994 677 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 PPP1R16BQ96T49 567 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 OSMRQ99650 979 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 LARP6Q9BRS8 491 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 TMEM121BQ9BXQ6 578 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 IRF2BPLQ9H1B7 796 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 SMOC2Q9H3U7 446 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 TLE6Q9H808 572 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 TYW1Q9NV66 732 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 GABBR1Q9UBS5 961 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 TCEAL9Q9UHQ7 104 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 CEP131Q9UPN4 1083 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 CHD6Q8TD26 2715 aa10.38□□□□□ -0.75
NIF3L1-203ENST00000409129 MAGEB2O15479 319 aa10.37□□□□□ -0.75
NIF3L1-203ENST00000409129 FGF18O76093 207 aa10.37□□□□□ -0.75
NIF3L1-203ENST00000409129 AKAP17AQ02040 695 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-203ENST00000409129 COASYQ13057 564 aa10.37□□□□□ -0.75
NIF3L1-203ENST00000409129 DSC3Q14574 896 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms