RNA–Protein interactions for RNA: ENST00000409001.5

SSFA2-202, Transcript of Sperm-specific antigen 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSFA2, Length 4,987 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-202ENST00000409001 ERICH1Q86X53 443 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 ZNF564Q8TBZ8 553 aaPredicted RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 N4BP2L2Q92802 583 aaPredicted RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 INTS2Q9H0H0 1204 aaKnown RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 NEXMIFQ5QGS0 1516 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 VAMP7P51809 220 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 KCTD2Q14681 263 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 SLC18A3Q16572 532 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 ZNF34Q8IZ26 560 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 GIMAP8Q8ND71 665 aaPredicted RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 RNF25Q96BH1 459 aaPredicted RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 KLK7P49862 253 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 RFFLQ8WZ73 363 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 RMDN3Q96TC7 470 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 TPX2Q9ULW0 747 aaKnown RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 PPP1R3GB7ZBB8 358 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 CHUKO15111 745 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 ASNSP08243 561 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 GARSP41250 739 aaKnown RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 C7orf25Q9BPX7 421 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 NUP85Q9BW27 656 aa16.92■□□□□ 0.3
SSFA2-202ENST00000409001 TRPC5Q9UL62 973 aaPredicted RBP16.92■□□□□ 0.3
SSFA2-202ENST00000409001 TRIM66O15016 1216 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 TLR3O15455 904 aaKnown RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 ECE1P42892 770 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 SEPT6Q14141 434 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 LRRC14Q15048 493 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 NMT1P30419 496 aaKnown RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 SRLQ86TD4 932 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 THNSL1Q8IYQ7 743 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 EIF2AK1Q9BQI3 630 aaKnown RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 SLITRK6Q9H5Y7 841 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 SCINQ9Y6U3 715 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 ABCB11O95342 1321 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 SH3BP5O60239 455 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 GSTA1P08263 222 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 GSTA2P09210 222 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 USP11P51784 963 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 GPSM2P81274 684 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 ITKQ08881 620 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 FAM47CQ5HY64 1035 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 TMEM270Q6UE05 265 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 RAPH1Q70E73 1250 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 TRIM42Q8IWZ5 723 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 GBP7Q8N8V2 638 aaPredicted RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 DNAAF3Q8N9W5 541 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 GSDMBQ8TAX9 411 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 PPP1R16BQ96T49 567 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 FAM213AQ9BRX8 229 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 GPC4O75487 556 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 TOM1L1O75674 476 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 ACTN3Q08043 901 aaPredicted RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 CCDC137Q6PK04 289 aaKnown RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 RNPC3Q96LT9 517 aaKnown RBP16.91■□□□□ 0.3
SSFA2-202ENST00000409001 INTUQ9ULD6 942 aa16.91■□□□□ 0.3
SSFA2-202ENST00000409001 SSU72P8A0A1W2PR75 194 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 IPO5O00410 1097 aaKnown RBP16.9■□□□□ 0.3
SSFA2-202ENST00000409001 MAPK13O15264 365 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 PRPSAP2O60256 369 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 PPP1R37O75864 691 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 ESRRAP11474 423 aaPredicted RBP16.9■□□□□ 0.3
SSFA2-202ENST00000409001 BRAFP15056 766 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 SPARCL1Q14515 664 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 DBN1Q16643 649 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 CDO1Q16878 200 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 HP1BP3Q5SSJ5 553 aaPredicted RBP16.9■□□□□ 0.3
SSFA2-202ENST00000409001 TRIM59Q8IWR1 403 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 DCLK2Q8N568 766 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 HVCN1Q96D96 273 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 SAAL1Q96ER3 474 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 VIPAS39Q9H9C1 493 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 IFT122Q9HBG6 1241 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 NGRNQ9NPE2 291 aaKnown RBP16.9■□□□□ 0.3
SSFA2-202ENST00000409001 RBM12Q9NTZ6 932 aaKnown RBP16.9■□□□□ 0.3
SSFA2-202ENST00000409001 CNTNAP5Q8WYK1 1306 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 A0A0G2JND7 137 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 DENND3A2RUS2 1198 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 ZBTB22O15209 634 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 TJP3O95049 919 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 CHRNA3P32297 505 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 RPAINQ86UA6 219 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 MED7O43513 233 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 PSMA2P25787 234 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 ST3GAL1Q11201 340 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 TROAPQ12815 778 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 MAML1Q92585 1016 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 LXNQ9BS40 222 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 EMSYQ7Z589 1322 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 H0Y3Z8 333 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 GOLGA8MH3BSY2 632 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 KRT14P02533 472 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 SOX5P35711 763 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 FRMD5Q7Z6J6 570 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 PCGF5Q86SE9 256 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 CFAP36Q96G28 342 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 NLRP4Q96MN2 994 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 MTMR4Q9NYA4 1195 aa16.9■□□□□ 0.3
SSFA2-202ENST00000409001 SMIM24O75264 130 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms