RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 GCOM1H8Y6P7 765 aaPredicted RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 ARVCFO00192 962 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 POLR2MP0CAP2 368 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CYP3A7P24462 503 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 HOXA13P31271 388 aaPredicted RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CASP14P31944 242 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CCT6AP40227 531 aaKnown RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 MTIF2P46199 727 aaKnown RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CDK7P50613 346 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 HSD17B4P51659 736 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CNTN2Q02246 1040 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 HYIQ5T013 277 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 HAUS3Q68CZ6 603 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 TTI2Q6NXR4 508 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 TRIM65Q6PJ69 517 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 SLC30A10Q6XR72 485 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 ALYREFQ86V81 257 aaKnown RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CREBRFQ8IUR6 639 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 ZNF710Q8N1W2 664 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 GUF1Q8N442 669 aaKnown RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 SNX29Q8TEQ0 813 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 RAD54LQ92698 747 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 EHMT1Q9H9B1 1298 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 CERS4Q9HA82 394 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 TAB2Q9NYJ8 693 aa14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 MAP3K20Q9NYL2 800 aaKnown RBP14.24□□□□□ -0.13
SMARCB1-203ENST00000407082 FAM86C2PA6NEL3 165 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 EFCAB8A8MWE9 144 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 RFXAPO00287 272 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 DUSP11O75319 330 aaKnown RBP14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 URI1O94763 535 aaPredicted RBP14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 IPO7O95373 1038 aaKnown RBP14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 KRT9P35527 623 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 CYLC1P35663 651 aaPredicted RBP14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 CCL23P55773 120 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 KRT83P78385 493 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 GRB10Q13322 594 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 TMEM119Q4V9L6 283 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 ARHGAP29Q52LW3 1261 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 FIGNQ5HY92 759 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 USP17L6PQ6QN14 398 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 CCDC65Q8IXS2 484 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 CPLX3Q8WVH0 158 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 UBXN4Q92575 508 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 TUBGCP2Q9BSJ2 902 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 ABHD10Q9NUJ1 306 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 ZNF215Q9UL58 517 aaPredicted RBP14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 CAPN11Q9UMQ6 739 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 ARIH1Q9Y4X5 557 aaPredicted RBP14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 ADGRG1Q9Y653 693 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 SLC4A7Q9Y6M7 1214 aa14.23□□□□□ -0.13
SMARCB1-203ENST00000407082 SYNGAP1Q96PV0 1343 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 MEIS2O14770 477 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 GNA14O95837 355 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 SNAI1O95863 264 aaPredicted RBP14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 GYPCP04921 128 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 GHRHRQ02643 423 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 CENPPQ6IPU0 288 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 CCSAPQ6IQ19 270 aaPredicted RBP14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 FAM133AQ8N9E0 248 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 EHBP1Q8NDI1 1231 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 SYTL5Q8TDW5 730 aaPredicted RBP14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 FAM20AQ96MK3 541 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 PURBQ96QR8 312 aaKnown RBP14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 PLIN2Q99541 437 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 MMTAG2Q9BU76 263 aaKnown RBP14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 HIPK3Q9H422 1215 aa14.22□□□□□ -0.13
SMARCB1-203ENST00000407082 A0A1W2PQJ5 194 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 SOWAHBA6NEL2 793 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 SPDYE3A6NKU9 549 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 PIK3CDO00329 1044 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 TDP2O95551 362 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 TBC1D8BQ0IIM8 1120 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 ACVR2BQ13705 512 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 UBE2SQ16763 222 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 FAM126BQ8IXS8 530 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 CCDC170Q8IYT3 715 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 CEP112Q8N8E3 955 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 MBOAT7Q96N66 472 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 TAAR1Q96RJ0 339 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 NOC4LQ9BVI4 516 aaKnown RBP14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 ANO3Q9BYT9 981 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 EDEM3Q9BZQ6 932 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 COL20A1Q9P218 1284 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 MAPK8IP1Q9UQF2 711 aa14.21□□□□□ -0.13
SMARCB1-203ENST00000407082 MYH7BA7E2Y1 1941 aa14.21□□□□□ -0.14
SMARCB1-203ENST00000407082 UMODL1Q5DID0 1318 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 CHD9Q3L8U1 2897 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 TUBBP07437 444 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 ZBED6P86452 979 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 CDK17Q00537 523 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 BEX3Q00994 111 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 GOLGA8FQ08AF8 430 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 GOLGA8DPQ0D2H9 430 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 MCM6Q14566 821 aa14.2□□□□□ -0.14
SMARCB1-203ENST00000407082 Q4G0T1 1027 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms