RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 AGPAT3Q9NRZ7 376 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 COL20A1Q9P218 1284 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 BZW2Q9Y6E2 419 aaKnown RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 SPDYE3A6NKU9 549 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 KRT18P05783 430 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 ANXA13P27216 316 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 NOP2P46087 812 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 CCT5P48643 541 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 NAP1L1P55209 391 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 CHADLQ6NUI6 762 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 GBP6Q6ZN66 633 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 OR2W6PQ8NHA6 318 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 TMEM174Q8WUU8 243 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 KAT2BQ92831 832 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 TMBIM4Q9HC24 238 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 TRPC5Q9UL62 973 aaPredicted RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 INTUQ9ULD6 942 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 SART1O43290 800 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 BUB1BO60566 1050 aaPredicted RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 TRIM49P0CI25 452 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 TRIM49CP0CI26 452 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 SOX5P35711 763 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 NPEPPSP55786 919 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 UBXN2AP68543 259 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 PAK2Q13177 524 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 RPS6KA1Q15418 735 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 AOC3Q16853 763 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 CALR3Q96L12 384 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.73□□□□□ -0.691e-6■■■■□ 26.4
MSH2-202ENST00000406134 GLIS2Q9BZE0 524 aaPredicted RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 RASSF4Q9H2L5 321 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 TTC7AQ9ULT0 858 aaPredicted RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 MGAMO43451 1857 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 ZNF536O15090 1300 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 MAGEA9P43362 315 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 ZNF844Q08AG5 666 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 DNAJC21Q5F1R6 531 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 ERMNQ8TAM6 284 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 PBKQ96KB5 322 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 PAGR1Q9BTK6 254 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 CELF4Q9BZC1 486 aaKnown RBP10.73□□□□□ -0.69
MSH2-202ENST00000406134 SLC12A6Q9UHW9 1150 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 SYNPO2Q9UMS6 1093 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 PLAAQ9Y263 795 aa10.73□□□□□ -0.69
MSH2-202ENST00000406134 FAM170AA1A519 330 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 DCDC2CA8MYV0 355 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 MYO1FO00160 1098 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 DHX15O43143 795 aaKnown RBP10.72□□□□□ -0.69
MSH2-202ENST00000406134 ZEB2O60315 1214 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 ENTPD3O75355 529 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 GUCY1A3Q02108 690 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 MCTP2Q6DN12 878 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 FAM186BQ8IYM0 893 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 WHAMMQ8TF30 809 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 BCS1LQ9Y276 419 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 TMX2Q9Y320 296 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 PCDHA3Q9Y5H8 950 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 RPTORQ8N122 1335 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 HSF2BPO75031 334 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 ITGB5P18084 799 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 ATP1A2P50993 1020 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 PLS1Q14651 629 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 KIF22Q14807 665 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 CCDC70Q6NSX1 233 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 AADACL2Q6P093 401 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 SLC35G2Q8TBE7 412 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 ALG3Q92685 438 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 DEFB129Q9H1M3 183 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 METTL14Q9HCE5 456 aaKnown RBP10.72□□□□□ -0.69
MSH2-202ENST00000406134 AMACRQ9UHK6 382 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 UBE4BO95155 1302 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 BRCA1P38398 1863 aaKnown RBP10.72□□□□□ -0.69
MSH2-202ENST00000406134 CHMP2AO43633 222 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 GAP43P17677 238 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 PDE6BP35913 854 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 DRAP1Q14919 205 aaPredicted RBP10.72□□□□□ -0.69
MSH2-202ENST00000406134 MSL1Q68DK7 614 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 IL31RAQ8NI17 732 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 SLC20A1Q8WUM9 679 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 SPAG5Q96R06 1193 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 MKNK1Q9BUB5 465 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 STK33Q9BYT3 514 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 ZDHHC18Q9NUE0 388 aa10.72□□□□□ -0.69
MSH2-202ENST00000406134 CNOT8Q9UFF9 292 aaKnown RBP10.72□□□□□ -0.69
MSH2-202ENST00000406134 TTI1O43156 1089 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 OPA1O60313 960 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 LSP1P33241 339 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 PRELPP51888 382 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 STAT2P52630 851 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 LRCH2Q5VUJ6 765 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 CPNE8Q86YQ8 564 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 ARHGEF19Q8IW93 802 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 TPH2Q8IWU9 490 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 NLGN1Q8N2Q7 840 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 ATP6V1G3Q96LB4 118 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 THAP2Q9H0W7 228 aa10.71□□□□□ -0.69
MSH2-202ENST00000406134 SHTN1A0MZ66 631 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms