RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 IFT74Q96LB3 600 aa4.09□□□□□ -1.76
RTN4-208ENST00000404909 TUT1Q9H6E5 874 aaKnown RBP4.09□□□□□ -1.76
RTN4-208ENST00000404909 KMT5AQ9NQR1 393 aa4.09□□□□□ -1.76
RTN4-208ENST00000404909 NRBP1Q9UHY1 535 aa4.09□□□□□ -1.76
RTN4-208ENST00000404909 ZNF215Q9UL58 517 aaPredicted RBP4.09□□□□□ -1.76
RTN4-208ENST00000404909 FAM184BQ9ULE4 1060 aa4.09□□□□□ -1.76
RTN4-208ENST00000404909 EMSYQ7Z589 1322 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 LRRIQ4A6NIV6 560 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 GPR25O00155 361 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 NKRFO15226 690 aaKnown RBP eCLIP4.08□□□□□ -1.76
RTN4-208ENST00000404909 MMP3P08254 477 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 NR2F2P24468 414 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 NPTX2P47972 431 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 FKBP3Q00688 224 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 DRP2Q13474 957 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 FILIP1LQ4L180 1135 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 COBLL1Q53SF7 1204 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 EPM2AIP1Q7L775 607 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 TMC6Q7Z403 805 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 HAUS6Q7Z4H7 955 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 IRF2BP1Q8IU81 584 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 RAET1EQ8TD07 263 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 BSNDQ8WZ55 320 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 MRFAP1L1Q96HT8 127 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CNOT6LQ96LI5 555 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 ZNF830Q96NB3 372 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 FIZ1Q96SL8 496 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TIPINQ9BVW5 301 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 NIFKQ9BYG3 293 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 AP5M1Q9H0R1 490 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 KCTD10Q9H3F6 313 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 THAP9Q9H5L6 903 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 DENND3A2RUS2 1198 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TEX33O43247 280 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CALUO43852 315 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 HBP1O60381 514 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 FGFR1OPO95684 399 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 MYL3P08590 195 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 C6orf222P0C671 652 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 XRCC5P13010 732 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 INSRRP14616 1297 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 SLC26A2P50443 739 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 SPAG1Q07617 926 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CCDC40Q4G0X9 1142 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 BRDTQ58F21 947 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 CEP135Q66GS9 1140 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 HS2ST1Q7LGA3 356 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 FAM114A1Q8IWE2 563 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TRPV1Q8NER1 839 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 ZNF507Q8TCN5 953 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 EMID1Q96A84 441 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 CTAGE1Q96RT6 745 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 PPP1R16BQ96T49 567 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 C16orf70Q9BSU1 422 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 BEGAINQ9BUH8 593 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 GBP3Q9H0R5 595 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 DHX33Q9H6R0 707 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 GNEQ9Y223 722 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 LRRC37A2A6NM11 1700 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 GOLGA6L6A8MZA4 724 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TISP43B9A030 160 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CETN3O15182 167 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 EIF3DO15371 548 aaKnown RBP eCLIP4.08□□□□□ -1.76
RTN4-208ENST00000404909 PGK1P00558 417 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TPM2P07951 284 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 GJB1P08034 283 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 SRGAP2CP0DJJ0 459 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 PRKAR2AP13861 404 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 AKR1A1P14550 325 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 HOXD10P28358 340 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 RFC5P40937 340 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CYP2J2P51589 502 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CLCN3P51790 818 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 UBXN1Q04323 297 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TARBP2Q15633 366 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 ZCWPW2Q504Y3 356 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 CCDC186Q7Z3E2 898 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 RHPN2Q8IUC4 686 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 RDH13Q8NBN7 331 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TMEM161BQ8NDZ6 487 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 DEPTORQ8TB45 409 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 ASAP3Q8TDY4 903 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 ZNF296Q8WUU4 475 aaPredicted RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 PRPF31Q8WWY3 499 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 BICD1Q96G01 975 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TUBGCP2Q9BSJ2 902 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 NOC4LQ9BVI4 516 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 PDLIM7Q9NR12 457 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 TYW1Q9NV66 732 aaKnown RBP4.08□□□□□ -1.76
RTN4-208ENST00000404909 INTS13Q9NVM9 706 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 USP20Q9Y2K6 914 aa4.08□□□□□ -1.76
RTN4-208ENST00000404909 ADGRA3Q8IWK6 1321 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 A0A1B0GTH6 734 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ZBTB42B2RXF5 422 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 PDXKO00764 312 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 TGFB1I1O43294 461 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ADCY3O60266 1144 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 MAFO75444 373 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 MYCP01106 439 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms