RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
RBM39-206ENST00000403542 GMNCA6NCL1 334 aa13□□□□□ -0.33
RBM39-206ENST00000403542 UBAP1LF5GYI3 381 aa13□□□□□ -0.33
RBM39-206ENST00000403542 PDXKO00764 312 aa13□□□□□ -0.33
RBM39-206ENST00000403542 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
RBM39-206ENST00000403542 RPL13P26373 211 aaKnown RBP13□□□□□ -0.33
RBM39-206ENST00000403542 FNTAP49354 379 aa13□□□□□ -0.33
RBM39-206ENST00000403542 CUL1Q13616 776 aa13□□□□□ -0.33
RBM39-206ENST00000403542 MCTP2Q6DN12 878 aa13□□□□□ -0.33
RBM39-206ENST00000403542 CCDC121Q6ZUS5 278 aa13□□□□□ -0.33
RBM39-206ENST00000403542 PHLDB2Q86SQ0 1253 aa13□□□□□ -0.33
RBM39-206ENST00000403542 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
RBM39-206ENST00000403542 ZSWIM2Q8NEG5 633 aa13□□□□□ -0.33
RBM39-206ENST00000403542 KRT35Q92764 455 aa13□□□□□ -0.33
RBM39-206ENST00000403542 TEKT1Q969V4 418 aa13□□□□□ -0.33
RBM39-206ENST00000403542 COG5Q9UP83 839 aa13□□□□□ -0.33
RBM39-206ENST00000403542 FOXO6A8MYZ6 492 aa13□□□□□ -0.33
RBM39-206ENST00000403542 F8VZ95 297 aa13□□□□□ -0.33
RBM39-206ENST00000403542 DLG4P78352 724 aa13□□□□□ -0.33
RBM39-206ENST00000403542 PPP4R3CPQ6ZMV5 832 aa13□□□□□ -0.33
RBM39-206ENST00000403542 CCDC26Q8TAB7 109 aa13□□□□□ -0.33
RBM39-206ENST00000403542 FMO2Q99518 471 aa13□□□□□ -0.33
RBM39-206ENST00000403542 AMNQ9BXJ7 453 aa13□□□□□ -0.33
RBM39-206ENST00000403542 DNAJC17Q9NVM6 304 aaKnown RBP13□□□□□ -0.33
RBM39-206ENST00000403542 FOXN3O00409 490 aaPredicted RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 DNM1LO00429 736 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 NDUFB10O96000 172 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 NT5C2P49902 561 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 PPP2R2AP63151 447 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 DR1Q01658 176 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 EPM2AIP1Q7L775 607 aaPredicted RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 CD302Q8IX05 232 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 FBXO25Q8TCJ0 367 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 KAT5Q92993 513 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 FAM84AQ96KN4 292 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 WRAP73Q9P2S5 460 aaPredicted RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 SLC12A6Q9UHW9 1150 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 BZW2Q9Y6E2 419 aaKnown RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 CDK5RAP2Q96SN8 1893 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 MYO3BQ8WXR4 1341 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 PITPNM2Q9BZ72 1349 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 LOC102724159A0A0B4J2E5 919 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 EXOC3O60645 756 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 BBOX1O75936 387 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 GH2P01242 217 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 CALCAP01258 141 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 TNFAIP3P21580 790 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 FGFR4P22455 802 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 CRKP46108 304 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 KCNJ1P48048 391 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 JAM2P57087 298 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 PWP2Q15269 919 aaKnown RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 ODR4Q5SWX8 454 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 MICALCLQ6ZW33 695 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 CEP57Q86XR8 500 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 OSBPL7Q9BZF2 842 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 MLXIPLQ9NP71 852 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 HAUS2Q9NVX0 235 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 CTTNBP2NLQ9P2B4 639 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 OPLAHO14841 1288 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 CTNND1O60716 968 aaKnown RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 ZBTB48P10074 688 aaPredicted RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 SOX5P35711 763 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 ECE1P42892 770 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 FMO5P49326 533 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 IFI35P80217 286 aaPredicted RBP12.99□□□□□ -0.33
RBM39-206ENST00000403542 ADCY1Q08828 1119 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 MESDQ14696 234 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 OTUD6AQ7L8S5 288 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 FAM178BQ8IXR5 827 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 MGARPQ8TDB4 240 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 LMBR1Q8WVP7 490 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 SCLT1Q96NL6 688 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 SWAP70Q9UH65 585 aa12.99□□□□□ -0.33
RBM39-206ENST00000403542 TCRBV7S2A1N4TA0A589 114 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 PSMC2P35998 433 aaKnown RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 LRCH2Q5VUJ6 765 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 NSMFQ6X4W1 530 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 C15orf52Q6ZUT6 534 aaKnown RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 PRPF38AQ8NAV1 312 aaKnown RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.337e-10■■□□□ 11.9
RBM39-206ENST00000403542 HES6Q96HZ4 224 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 SEC16BQ96JE7 1060 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 POP1Q99575 1024 aaKnown RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 WDR18Q9BV38 432 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 UBE2TQ9NPD8 197 aaPredicted RBP12.98□□□□□ -0.33
RBM39-206ENST00000403542 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 STXBP5LQ9Y2K9 1186 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 TMEM150BA6NC51 233 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 GCLMP48507 274 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 PHLDB3Q6NSJ2 640 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 RUFY4Q6ZNE9 571 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 CNPY4Q8N129 248 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 ARFGAP2Q8N6H7 521 aa12.98□□□□□ -0.33
RBM39-206ENST00000403542 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms