RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 STN1Q9H668 368 aaKnown RBP8.55□□□□□ -1.04
USP47-203ENST00000399455 ZNF148Q9UQR1 794 aa8.55□□□□□ -1.04
USP47-203ENST00000399455 PASKQ96RG2 1323 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 IL18RAPO95256 599 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 AKR1B1P15121 316 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 PLCG1P19174 1290 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 OR1G1P47890 313 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 LRRC63Q05C16 580 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 NKX1-1Q15270 411 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 C8orf34Q49A92 452 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 NOTUMQ6P988 496 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 CCDC62Q6P9F0 684 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 CPLX4Q7Z7G2 160 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 NSUN4Q96CB9 384 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 HOMER3Q9NSC5 361 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 NWD1Q149M9 1564 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 CXCL11O14625 94 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 YWHABP31946 246 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 FBXW4P57775 412 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 RBM10P98175 930 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 NOGQ13253 232 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 FRA10AC1Q70Z53 315 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 TMEM199Q8N511 208 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 FBXO18Q8NFZ0 1043 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 OR8K1Q8NGG5 319 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 ASIC4Q96FT7 647 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 ADAMTS13Q76LX8 1427 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 TMEM88BA6NKF7 163 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 PSMA2P25787 234 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 CACNB1Q02641 598 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 DNAJC21Q5F1R6 531 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 SDCCAG8Q86SQ7 713 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 ZNF589Q86UQ0 364 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 GPD1LQ8N335 351 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 UCMAQ8WVF2 138 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 MTG1Q9BT17 334 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 OSBPL3Q9H4L5 887 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 BARHL2Q9NY43 387 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 RGL2O15211 777 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 MAP3K13O43283 966 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 EVI5O60447 810 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 URODP06132 367 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 HSPA8P11142 646 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 BAATQ14032 418 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 EPHA7Q15375 998 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 KLC3Q6P597 504 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 BHMT2Q9H2M3 363 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 RAB23Q9ULC3 237 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 NEDD4P46934 1319 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 GOLGA8IPA6NC78 632 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 GOLGA8JA6NMD2 632 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 A8MXQ7 604 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 GAS2O43903 313 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 IGKV5-2P06315 115 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 SAT1P21673 171 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 PRKCQQ04759 706 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 C16orf86Q6ZW13 317 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 GAS2L1Q99501 681 aaPredicted RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 MXD3Q9BW11 206 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 FSD1LQ9BXM9 530 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 THG1LQ9NWX6 298 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 ITM2BQ9Y287 266 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 MROH7Q68CQ1 1323 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 TMCC1O94876 653 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 PLEKHA8P1O95397 391 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 PRAMEF18Q5VWM3 479 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 KLHL7Q8IXQ5 586 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 PIGOQ8TEQ8 1089 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 OLA1Q9NTK5 396 aaKnown RBP8.54□□□□□ -1.04
USP47-203ENST00000399455 CPA4Q9UI42 421 aa8.54□□□□□ -1.04
USP47-203ENST00000399455 FKBP1BP68106 108 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 C10orf67Q8IYJ2 551 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 TTC30BQ8N4P2 665 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 TSC1Q92574 1164 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 NUDCD1Q96RS6 583 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 SEPT5Q99719 369 aaPredicted RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 TRIM31Q9BZY9 425 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 THAP9Q9H5L6 903 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 TRIM45Q9H8W5 580 aaPredicted RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 KIAA1468Q9P260 1216 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 CLIC4Q9Y696 253 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 KRIT1O00522 736 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 EIF2B5Q13144 721 aaKnown RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 SBK1Q52WX2 424 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 C12orf60Q5U649 245 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 RAD54LQ92698 747 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 PXDNLA1KZ92 1463 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 ODC1P11926 461 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 CDK17Q00537 523 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 ADAT2Q7Z6V5 191 aaKnown RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 XXYLT1Q8NBI6 393 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 FAM213AQ9BRX8 229 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 SLC16A4O15374 487 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 TTI1O43156 1089 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
USP47-203ENST00000399455 CYP21A2P08686 494 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 RHOXF2BP0C7M4 288 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 TMEM132DQ14C87 1099 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 CCDC121Q6ZUS5 278 aa8.53□□□□□ -1.04
USP47-203ENST00000399455 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms