RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 ZMIZ1Q9ULJ6 1067 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 AGAP1Q9UPQ3 857 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 PTPN22Q9Y2R2 807 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 DISP2A7MBM2 1401 aa10.73□□□□□ -0.69
PTCHD4-202ENST00000398738 LRP6O75581 1613 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 NR2F2P24468 414 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 BIRC2Q13490 618 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC51AQ86UW1 340 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 ZNF34Q8IZ26 560 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 SCFD2Q8WU76 684 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 KCNK9Q9NPC2 374 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.72□□□□□ -0.696e-11■■■□□ 16.5
PTCHD4-202ENST00000398738 SWAP70Q9UH65 585 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 TJP1Q07157 1748 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 M0R2N6 131 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 UBOX5O94941 541 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 XRCC4Q13426 336 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 MTMR3Q13615 1198 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 CRYMQ14894 314 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 DENND2CQ68D51 928 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 FMNL3Q8IVF7 1028 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 GDAP1Q8TB36 358 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 EPS8L3Q8TE67 593 aaKnown RBP10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 CELF1Q92879 486 aaKnown RBP10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 NAGPAQ9UK23 515 aa10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
PTCHD4-202ENST00000398738 MEIS1O00470 390 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 CLIC2O15247 247 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 PPP1R2P41236 205 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 GNAQP50148 359 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 SATB1Q01826 763 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 CRTC2Q53ET0 693 aaPredicted RBP10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 SLC17A8Q8NDX2 589 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 FBXO25Q8TCJ0 367 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 RAD54LQ92698 747 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 ZNF622Q969S3 477 aaKnown RBP eCLIP10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 ZMYND12Q9H0C1 365 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 ATP6V0A4Q9HBG4 840 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 MYH7P12883 1935 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 EME2A4GXA9 379 aaPredicted RBP10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 LAD1O00515 517 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 PPIP5K2O43314 1243 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 MGRN1O60291 552 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 ADAMTS2O95450 1211 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 H2AFZP0C0S5 128 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 GNA11P29992 359 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 H2AFVQ71UI9 128 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 TRPM8Q7Z2W7 1104 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 TPCN2Q8NHX9 752 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 SH3RF3Q8TEJ3 882 aaPredicted RBP10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 KLHL29Q96CT2 875 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 IQCDQ96DY2 449 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 PBKQ96KB5 322 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 IKZF4Q9H2S9 585 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 SEMA4AQ9H3S1 761 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 BCAS3Q9H6U6 928 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 FGFR1OP2Q9NVK5 253 aa10.71□□□□□ -0.69
PTCHD4-202ENST00000398738 TMEM88BA6NKF7 163 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 PRPHP41219 470 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 GRM4Q14833 912 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 ERMARDQ5T6L9 678 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 TXNRD3Q86VQ6 643 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 GLYCTKQ8IVS8 523 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 GPR101Q96P66 508 aaPredicted RBP10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 PAIP2Q9BPZ3 127 aaKnown RBP10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 FAM129AQ9BZQ8 928 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 HDAC9Q9UKV0 1011 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 IVNS1ABPQ9Y6Y0 642 aa10.71□□□□□ -0.7
PTCHD4-202ENST00000398738 BAZ2AQ9UIF9 1905 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 IGF2BP3O00425 579 aaKnown RBP eCLIP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 UCHL3P15374 230 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 CREB1P16220 341 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 STAT3P40763 770 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 ALDH5A1P51649 535 aaPredicted RBP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 MRPL12P52815 198 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 DR1Q01658 176 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 EXOC3L4Q17RC7 722 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 AGBL2Q5U5Z8 902 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 GPBP1Q86WP2 473 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 LMBR1Q8WVP7 490 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 ZBTB10Q96DT7 871 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 ECT2Q9H8V3 914 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 MAGEF1Q9HAY2 307 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 ERVK-5Q9HDB9 667 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 SH3GLB2Q9NR46 395 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 DAAM1Q9Y4D1 1078 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 GOLGB1Q14789 3259 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 PVALEFA0A1B0GWK0 134 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 SFI1A8K8P3 1242 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 POTECB2RU33 542 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 CETN3O15182 167 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 PMS2P54278 862 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 USP46P62068 366 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 ERFEQ4G0M1 354 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 EMC10Q5UCC4 262 aa10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 LRRC47Q8N1G4 583 aaKnown RBP10.7□□□□□ -0.7
PTCHD4-202ENST00000398738 TMEM59LQ9UK28 342 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms