RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 SFNP31947 248 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 HERVK_113P62684 666 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 PLCB3Q01970 1234 aa16.53■□□□□ 0.24
MCF2L-205ENST00000397017 ELOA2Q8IYF1 753 aaPredicted RBP16.53■□□□□ 0.24
MCF2L-205ENST00000397017 POP1Q99575 1024 aaKnown RBP16.53■□□□□ 0.24
MCF2L-205ENST00000397017 NPM3O75607 178 aaKnown RBP16.52■□□□□ 0.24
MCF2L-205ENST00000397017 MESDQ14696 234 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-205ENST00000397017 GLYCTKQ8IVS8 523 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 ETNPPLQ8TBG4 499 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 SELENOOQ9BVL4 669 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 SPATC1LQ9H0A9 340 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 ASCC2Q9H1I8 757 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-205ENST00000397017 AGO4Q9HCK5 861 aaKnown RBP16.52■□□□□ 0.24
MCF2L-205ENST00000397017 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 M0R2N6 131 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 SPATA31C1P0DKV0 1188 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 TMEM119Q4V9L6 283 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 NT5C1BQ96P26 610 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 PI4K2AQ9BTU6 479 aa16.52■□□□□ 0.24
MCF2L-205ENST00000397017 POLR3CQ9BUI4 534 aaPredicted RBP16.52■□□□□ 0.24
MCF2L-205ENST00000397017 PDXKO00764 312 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 EIF3JO75822 258 aaKnown RBP16.52■□□□□ 0.23
MCF2L-205ENST00000397017 CYP2B6P20813 491 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 VAMP7P51809 220 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 PASD1Q8IV76 773 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 TRIM58Q8NG06 486 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 CDC23Q9UJX2 597 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 CNTNAP1P78357 1384 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 NID2Q14112 1375 aa16.52■□□□□ 0.23
MCF2L-205ENST00000397017 FDX1P10109 184 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 ZNF157P51786 506 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 SNAPC2Q13487 334 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 SMC1AQ14683 1233 aaKnown RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 BTNL9Q6UXG8 535 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 FASTKD5Q7L8L6 764 aaKnown RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 NUCKS1Q9H1E3 243 aaKnown RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 VPS33BQ9H267 617 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 HSD3B7Q9H2F3 369 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 ERLIN2O94905 339 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 TMOD1P28289 359 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 EPC2Q52LR7 807 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 MCPH1Q8NEM0 835 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 TRAPPC12Q8WVT3 735 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 TARS2Q9BW92 718 aaKnown RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 SMARCAL1Q9NZC9 954 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 SMIM23A6NLE4 172 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 CLDN3O15551 220 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 TBC1D12O60347 775 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 HIRAP54198 1017 aaPredicted RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 NEDD9Q14511 834 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 BMS1Q14692 1282 aaKnown RBP16.51■□□□□ 0.23
MCF2L-205ENST00000397017 MAATS1Q7Z4T9 603 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 KIFAP3Q92845 792 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 HSPBP1Q9NZL4 362 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 C8orf74Q6P047 294 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 CCDC25Q86WR0 208 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 LMBR1Q8WVP7 490 aa16.51■□□□□ 0.23
MCF2L-205ENST00000397017 GSTTP1A0A1W2PQM5 241 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 EPHB6O15197 1021 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 TCF7P36402 384 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-205ENST00000397017 RARRES1P49788 294 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 SLC12A3P55017 1021 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 BRDTQ58F21 947 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-205ENST00000397017 TAX1BP1Q86VP1 789 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 COPS5Q92905 334 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 PCDHB4Q9Y5E5 795 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 C2orf54Q08AI8 447 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 ARSHQ5FYA8 562 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 MOXD1Q6UVY6 613 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 CBWD2Q8IUF1 395 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 AGPAT3Q9NRZ7 376 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 A0A1W2PQC6 194 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-205ENST00000397017 ZNF185O15231 689 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 DYNC1LI2O43237 492 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-205ENST00000397017 PSMD10O75832 226 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 SERPING1P05155 500 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 UCHL3P15374 230 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 SLC7A5Q01650 507 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 ITGB3BPQ13352 177 aaPredicted RBP16.5■□□□□ 0.23
MCF2L-205ENST00000397017 IRF2BP1Q8IU81 584 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 SPATA20Q8TB22 786 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 CPA4Q9UI42 421 aa16.5■□□□□ 0.23
MCF2L-205ENST00000397017 VPS41P49754 854 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 VAV2P52735 878 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 NFX1Q12986 1120 aaKnown RBP16.49■□□□□ 0.23
MCF2L-205ENST00000397017 PPP2R5AQ15172 486 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 PCNX4Q63HM2 1172 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 NEK9Q8TD19 979 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 CEP72Q9P209 647 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 MRPS9P82933 396 aaKnown RBP16.49■□□□□ 0.23
MCF2L-205ENST00000397017 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 TAF1CQ15572 869 aaPredicted RBP16.49■□□□□ 0.23
MCF2L-205ENST00000397017 UGCGQ16739 394 aa16.49■□□□□ 0.23
MCF2L-205ENST00000397017 KCTD19Q17RG1 926 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms