RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 ZNF579Q8NAF0 562 aaKnown RBP20.57■□□□□ 0.88
FXN-203ENST00000396366 KLHL23Q8NBE8 558 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 WASF1Q92558 559 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 PLVAPQ9BX97 442 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 C1orf112Q9NSG2 853 aa20.57■□□□□ 0.88
FXN-203ENST00000396366 WRAP73Q9P2S5 460 aaPredicted RBP20.57■□□□□ 0.88
FXN-203ENST00000396366 IGKV6-21A0A0C4DH24 114 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 H3BQ06 376 aaPredicted RBP20.56■□□□□ 0.88
FXN-203ENST00000396366 PSMC5P62195 406 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 LEXMQ3ZCV2 418 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 EP400NLQ6ZTU2 488 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 SPPL3Q8TCT6 385 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 NLRP7Q8WX94 980 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 FAM20AQ96MK3 541 aa20.56■□□□□ 0.88
FXN-203ENST00000396366 BTBD18B2RXH4 712 aa20.55■□□□□ 0.88
FXN-203ENST00000396366 DARSP14868 501 aaKnown RBP20.55■□□□□ 0.88
FXN-203ENST00000396366 GCFC2P16383 781 aaKnown RBP20.55■□□□□ 0.88
FXN-203ENST00000396366 GTF2F1P35269 517 aaKnown RBP eCLIP20.55■□□□□ 0.88
FXN-203ENST00000396366 NPEPPSP55786 919 aa20.55■□□□□ 0.88
FXN-203ENST00000396366 KSR1Q8IVT5 923 aa20.55■□□□□ 0.88
FXN-203ENST00000396366 SCLT1Q96NL6 688 aa20.55■□□□□ 0.88
FXN-203ENST00000396366 LMAN2LQ9H0V9 348 aa20.55■□□□□ 0.88
FXN-203ENST00000396366 PLXNA4Q9HCM2 1894 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 WNT7AO00755 349 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 MARCH6O60337 910 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 MAFO75444 373 aaPredicted RBP20.54■□□□□ 0.88
FXN-203ENST00000396366 MMP1P03956 469 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 IRS1P35568 1242 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 QARSP47897 775 aaKnown RBP20.54■□□□□ 0.88
FXN-203ENST00000396366 HYAL1Q12794 435 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 NEK9Q8TD19 979 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 P2RX5Q93086 422 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 IGFLR1Q9H665 355 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 ATP6V0A4Q9HBG4 840 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 CD320Q9NPF0 282 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 RNF19AQ9NV58 838 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 TYW1Q9NV66 732 aaKnown RBP20.54■□□□□ 0.88
FXN-203ENST00000396366 TMEM161AQ9NX61 479 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 RGL1Q9NZL6 768 aa20.54■□□□□ 0.88
FXN-203ENST00000396366 SUCLA2Q9P2R7 463 aaPredicted RBP20.54■□□□□ 0.88
FXN-203ENST00000396366 A0A087WZ62 844 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 ZBTB39O15060 712 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 TBX3O15119 743 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 IL9P15248 144 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 LTBRP36941 435 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 SPIRE1Q08AE8 756 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 COL19A1Q14993 1142 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 SPOUT1Q5T280 376 aaKnown RBP20.53■□□□□ 0.88
FXN-203ENST00000396366 NCAPH2Q6IBW4 605 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 PTCRAQ6ISU1 281 aaPredicted RBP20.53■□□□□ 0.88
FXN-203ENST00000396366 FAM43BQ6ZT52 329 aaPredicted RBP20.53■□□□□ 0.88
FXN-203ENST00000396366 RHPN2Q8IUC4 686 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 PABPC5Q96DU9 382 aaKnown RBP20.53■□□□□ 0.88
FXN-203ENST00000396366 FDXACB1Q9BRP7 624 aaPredicted RBP20.53■□□□□ 0.88
FXN-203ENST00000396366 CYP26B1Q9NR63 512 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 CLDND1Q9NY35 253 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 PCDHGC5Q9Y5F6 944 aa20.53■□□□□ 0.88
FXN-203ENST00000396366 LINC01565O15544 149 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 P4HBP07237 508 aaKnown RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 ZSCAN20P17040 1043 aaPredicted RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 DNM2P50570 870 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 GUCY1B3Q02153 619 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 DLX2Q07687 328 aaPredicted RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 CTTNQ14247 550 aaKnown RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 EPHA7Q15375 998 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 LRRC55Q6ZSA7 311 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 ADGRD2Q7Z7M1 963 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 DIS3L2Q8IYB7 885 aaKnown RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 RNF169Q8NCN4 708 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 POF1BQ8WVV4 589 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 DYDC2Q96IM9 177 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 NAP1L4Q99733 375 aaKnown RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 CWH43Q9H720 699 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 ELAC1Q9H777 363 aaKnown RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
FXN-203ENST00000396366 BMP2KQ9NSY1 1161 aaPredicted RBP20.52■□□□□ 0.88
FXN-203ENST00000396366 GRXCR2A6NFK2 248 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 EIF5BO60841 1220 aaKnown RBP20.51■□□□□ 0.87
FXN-203ENST00000396366 CYP4A11Q02928 519 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 NAALADL2Q58DX5 795 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 ECHDC2Q86YB7 292 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 CCDC83Q8IWF9 413 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 ZNF710Q8N1W2 664 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 KHSRPQ92945 711 aaKnown RBP eCLIP20.51■□□□□ 0.87
FXN-203ENST00000396366 CEP170P1Q96L14 293 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 CASD1Q96PB1 797 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 KIF2CQ99661 725 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 LXNQ9BS40 222 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 GCOM2Q9BZD3 368 aaPredicted RBP20.51■□□□□ 0.87
FXN-203ENST00000396366 LIMCH1Q9UPQ0 1083 aa20.51■□□□□ 0.87
FXN-203ENST00000396366 CLUL1Q15846 466 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 CTC1Q2NKJ3 1217 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 C8orf34Q49A92 452 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 SLFN12Q8IYM2 578 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 COLGALT1Q8NBJ5 622 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 TMEM143Q96AN5 459 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 NLRP4Q96MN2 994 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
FXN-203ENST00000396366 PCDHB12Q9Y5F1 795 aa20.5■□□□□ 0.87
FXN-203ENST00000396366 SLITRK3O94933 977 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms