RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 SHC4Q6S5L8 630 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 C16orf59Q7L2K0 433 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 RHPN2Q8IUC4 686 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 MCPH1Q8NEM0 835 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 PRPF31Q8WWY3 499 aaKnown RBP21.34■■□□□ 1.01
HOXA9-202ENST00000396345 PSPC1Q8WXF1 523 aaKnown RBP21.34■■□□□ 1.01
HOXA9-202ENST00000396345 VWCEQ96DN2 955 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 PANK2Q9BZ23 570 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 CDHR5Q9HBB8 845 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 SIP14410 1827 aa21.34■■□□□ 1.01
HOXA9-202ENST00000396345 GHRP10912 638 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 GPC3P51654 580 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 CRYBB1P53674 252 aaPredicted RBP21.33■■□□□ 1.01
HOXA9-202ENST00000396345 FBXO47Q5MNV8 452 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 PSRC1Q6PGN9 363 aaPredicted RBP21.33■■□□□ 1.01
HOXA9-202ENST00000396345 CCDC73Q6ZRK6 1079 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 MAEAQ7L5Y9 396 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 SYT2Q8N9I0 419 aaPredicted RBP21.33■■□□□ 1.01
HOXA9-202ENST00000396345 LRRC15Q8TF66 581 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 ZNF668Q96K58 619 aaPredicted RBP21.33■■□□□ 1.01
HOXA9-202ENST00000396345 SCLT1Q96NL6 688 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 OSBPL7Q9BZF2 842 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 ADAMTS10Q9H324 1103 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 GDPD2Q9HCC8 539 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 BLOC1S4Q9NUP1 217 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 COL4A3BPQ9Y5P4 624 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 SQORQ9Y6N5 450 aa21.33■■□□□ 1.01
HOXA9-202ENST00000396345 TET1Q8NFU7 2136 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 ASAP2O43150 1006 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 FGBP02675 491 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 ARL2P36404 184 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 SLC12A3P55017 1021 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 LAMTOR4Q0VGL1 99 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 LPIN1Q14693 890 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 TMEM240Q5SV17 173 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 FAM102BQ5T8I3 360 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 RESP18Q5W5W9 173 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 RINT1Q6NUQ1 792 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 ZNF365Q70YC5 407 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 KSR1Q8IVT5 923 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 NLRP7Q8WX94 980 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 RAD54LQ92698 747 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 OSMRQ99650 979 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.32■■□□□ 1
HOXA9-202ENST00000396345 POLR3FQ9H1D9 316 aaPredicted RBP21.32■■□□□ 1
HOXA9-202ENST00000396345 FAM13BQ9NYF5 915 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 STK17AQ9UEE5 414 aa21.32■■□□□ 1
HOXA9-202ENST00000396345 DHX8Q14562 1220 aaKnown RBP21.31■■□□□ 1
HOXA9-202ENST00000396345 MCM6Q14566 821 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 MXD4Q14582 209 aaPredicted RBP21.31■■□□□ 1
HOXA9-202ENST00000396345 ADALQ6DHV7 355 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 TSHZ1Q6ZSZ6 1077 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 C1orf186Q6ZWK4 172 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 ZNF410Q86VK4 478 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 PDILTQ8N807 584 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 USP38Q8NB14 1042 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 LARP4BQ92615 738 aaKnown RBP21.31■■□□□ 1
HOXA9-202ENST00000396345 NLRP4Q96MN2 994 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 RUSC1Q9BVN2 902 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 PRO3102Q9H379 93 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 GPRC5CQ9NQ84 441 aa21.31■■□□□ 1
HOXA9-202ENST00000396345 COLQQ9Y215 455 aaPredicted RBP21.31■■□□□ 1
HOXA9-202ENST00000396345 A0A087WZ62 844 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 A0A087X0B3 334 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 RBAK-RBAKDNI3L0D1 243 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 SRGAP2CP0DJJ0 459 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 ACTN1P12814 892 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 STAT6P42226 847 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 PLEKHG4Q58EX7 1191 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 CNKSR3Q6P9H4 555 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 DBF4BQ8NFT6 615 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 ASAP3Q8TDY4 903 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 SEPT8Q92599 483 aa21.3■■□□□ 1
HOXA9-202ENST00000396345 FDXACB1Q9BRP7 624 aaPredicted RBP21.3■■□□□ 1
HOXA9-202ENST00000396345 IFIH1Q9BYX4 1025 aaKnown RBP21.3■■□□□ 1
HOXA9-202ENST00000396345 GCOM2Q9BZD3 368 aaPredicted RBP21.3■■□□□ 1
HOXA9-202ENST00000396345 NOC2LQ9Y3T9 749 aaKnown RBP21.3■■□□□ 1
HOXA9-202ENST00000396345 RPS6KA5O75582 802 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 GLRA2P23416 452 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 EIF4BP23588 611 aaKnown RBP21.29■■□□□ 1
HOXA9-202ENST00000396345 CMA1P23946 247 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 CD52P31358 61 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 SHHQ15465 462 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 NAALADL2Q58DX5 795 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 C9orf50Q5SZB4 431 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 OTOP2Q7RTS6 562 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 GPBP1Q86WP2 473 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 TMEM40Q8WWA1 233 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 KIFAP3Q92845 792 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 TIPINQ9BVW5 301 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 AGO3Q9H9G7 860 aaKnown RBP21.29■■□□□ 1
HOXA9-202ENST00000396345 POLD4Q9HCU8 107 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 KCND2Q9NZV8 630 aa21.29■■□□□ 1
HOXA9-202ENST00000396345 DARSP14868 501 aaKnown RBP21.28■■□□□ 1
HOXA9-202ENST00000396345 GUCY2CP25092 1073 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 PAK2Q13177 524 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 TFDP1Q14186 410 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 TCTN1Q2MV58 587 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 TPRNQ4KMQ1 711 aa21.28■■□□□ 1
HOXA9-202ENST00000396345 SV2BQ7L1I2 683 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms