RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 IRS1P35568 1242 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 DLX2Q07687 328 aaPredicted RBP18.2■□□□□ 0.5
CXCL12-206ENST00000395795 LRRC55Q6ZSA7 311 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 POTEDQ86YR6 584 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 FAM20AQ96MK3 541 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 KIF2CQ99661 725 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 CWH43Q9H720 699 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 ELAC1Q9H777 363 aaKnown RBP18.2■□□□□ 0.5
CXCL12-206ENST00000395795 AKT3Q9Y243 479 aa18.2■□□□□ 0.5
CXCL12-206ENST00000395795 CCDC194A0A1B0GVG4 234 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 H3BQ06 376 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-206ENST00000395795 CSDE1O75534 798 aaKnown RBP18.19■□□□□ 0.5
CXCL12-206ENST00000395795 IL9P15248 144 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 GCFC2P16383 781 aaKnown RBP18.19■□□□□ 0.5
CXCL12-206ENST00000395795 ATF7P17544 494 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-206ENST00000395795 FGFR4P22455 802 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 TBC1D8BQ0IIM8 1120 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 MTERF2Q49AM1 385 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 ZNF598Q86UK7 904 aaKnown RBP18.19■□□□□ 0.5
CXCL12-206ENST00000395795 MAP7D2Q96T17 732 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 TMEM161AQ9NX61 479 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 SEPT9Q9UHD8 586 aaPredicted RBP18.19■□□□□ 0.5
CXCL12-206ENST00000395795 PCDHB7Q9Y5E2 793 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 PCDHGC5Q9Y5F6 944 aa18.19■□□□□ 0.5
CXCL12-206ENST00000395795 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 DENND3A2RUS2 1198 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 GRXCR2A6NFK2 248 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 TBX3O15119 743 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 MAFO75444 373 aaPredicted RBP18.18■□□□□ 0.5
CXCL12-206ENST00000395795 NEK4P51957 841 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 NPEPPSP55786 919 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 PSMC5P62195 406 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 NAALADL2Q58DX5 795 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 PLA2G4FQ68DD2 849 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 ADGRD2Q7Z7M1 963 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 FAM178BQ8IXR5 827 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 IL27Q8NEV9 243 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
CXCL12-206ENST00000395795 TYW1Q9NV66 732 aaKnown RBP18.18■□□□□ 0.5
CXCL12-206ENST00000395795 TBKBP1A7MCY6 615 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 LINC01565O15544 149 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 CCNT1O60563 726 aaKnown RBP18.17■□□□□ 0.5
CXCL12-206ENST00000395795 TBX10O75333 385 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 TMOD1P28289 359 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 CLLU1OSQ5K130 101 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 ODR4Q5SWX8 454 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 ECHDC2Q86YB7 292 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 ZNF710Q8N1W2 664 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 EPHX3Q9H6B9 360 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 RGL1Q9NZL6 768 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 LRFN2Q9ULH4 789 aa18.17■□□□□ 0.5
CXCL12-206ENST00000395795 DDX11L8A8MPP1 907 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 BTBD18B2RXH4 712 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 ZBTB39O15060 712 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 IBSPP21815 317 aaPredicted RBP18.16■□□□□ 0.5
CXCL12-206ENST00000395795 QARSP47897 775 aaKnown RBP18.16■□□□□ 0.5
CXCL12-206ENST00000395795 EPHA7Q15375 998 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 PTCRAQ6ISU1 281 aaPredicted RBP18.16■□□□□ 0.5
CXCL12-206ENST00000395795 KSR1Q8IVT5 923 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 POF1BQ8WVV4 589 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 DHX33Q9H6R0 707 aaKnown RBP18.16■□□□□ 0.5
CXCL12-206ENST00000395795 IFT122Q9HBG6 1241 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 CYP26B1Q9NR63 512 aa18.16■□□□□ 0.5
CXCL12-206ENST00000395795 A0A087WZ62 844 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 A0A0U1RQF3 1178 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 P4HBP07237 508 aaKnown RBP18.15■□□□□ 0.5
CXCL12-206ENST00000395795 XBP1P17861 261 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 KRT2P35908 639 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 ADAM15Q13444 863 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 C8orf34Q49A92 452 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 C4orf19Q8IY42 314 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 COLGALT1Q8NBJ5 622 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 WASF1Q92558 559 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 FDXACB1Q9BRP7 624 aaPredicted RBP18.15■□□□□ 0.5
CXCL12-206ENST00000395795 TMEM117Q9H0C3 514 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 ATP6V0A4Q9HBG4 840 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 C11orf16Q9NQ32 467 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 CLDND1Q9NY35 253 aa18.15■□□□□ 0.5
CXCL12-206ENST00000395795 SUCLA2Q9P2R7 463 aaPredicted RBP18.15■□□□□ 0.5
CXCL12-206ENST00000395795 FSCN2O14926 492 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 CSPG5O95196 566 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 GLP2RO95838 553 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 ERVFC1P60507 584 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 DIS3L2Q8IYB7 885 aaKnown RBP18.14■□□□□ 0.49
CXCL12-206ENST00000395795 DYDC2Q96IM9 177 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 MSLNLQ96KJ4 702 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 MTMR9Q96QG7 549 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 HSD17B14Q9BPX1 270 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 LXNQ9BS40 222 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 TRAIPQ9BWF2 469 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 CLEC1BQ9P126 229 aa18.14■□□□□ 0.49
CXCL12-206ENST00000395795 FGF18O76093 207 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 SLITRK3O94933 977 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 ZNF410Q86VK4 478 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 VN1R2Q8NFZ6 395 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 NLRP7Q8WX94 980 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 TMEM60Q9H2L4 133 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 MINDY3Q9H8M7 445 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 XPNPEP1Q9NQW7 623 aa18.13■□□□□ 0.49
CXCL12-206ENST00000395795 C19orf67A6NJJ6 358 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms