RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 MYH11P35749 1972 aa18.87■□□□□ 0.61
ERCC2-202ENST00000391942 MBLAC1A4D2B0 266 aaPredicted RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 EN2P19622 333 aaPredicted RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 PTGISQ16647 500 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 HERC4Q5GLZ8 1057 aaPredicted RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 SESTD1Q86VW0 696 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 SFR1Q86XK3 245 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 ANKLE1Q8NAG6 615 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 ASAP3Q8TDY4 903 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 BSNDQ8WZ55 320 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 PAWRQ96IZ0 340 aaKnown RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 PPP1R16BQ96T49 567 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 ANP32EQ9BTT0 268 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 TIPINQ9BVW5 301 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 TRMT13Q9NUP7 481 aaKnown RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 EXOC1Q9NV70 894 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 SUCLA2Q9P2R7 463 aaPredicted RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 MAN1B1Q9UKM7 699 aa18.86■□□□□ 0.61
ERCC2-202ENST00000391942 KIAA0100Q14667 2235 aaKnown RBP18.86■□□□□ 0.61
ERCC2-202ENST00000391942 SYCE3A1L190 88 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 ARVCFO00192 962 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 DNM2P50570 870 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 ZSCAN23Q3MJ62 389 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 RBM43Q6ZSC3 357 aaKnown RBP18.85■□□□□ 0.61
ERCC2-202ENST00000391942 KSR1Q8IVT5 923 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 LINC01465Q8N7H1 131 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 SLC43A3Q8NBI5 491 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 SPATA20Q8TB22 786 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 TCP11Q8WWU5 503 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 PRPF31Q8WWY3 499 aaKnown RBP18.85■□□□□ 0.61
ERCC2-202ENST00000391942 KIFAP3Q92845 792 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 ZNF668Q96K58 619 aaPredicted RBP18.85■□□□□ 0.61
ERCC2-202ENST00000391942 TRPV6Q9H1D0 765 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 PARVGQ9HBI0 331 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 AKT3Q9Y243 479 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 PCDHA2Q9Y5H9 948 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 COL4A3BPQ9Y5P4 624 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 DNAH12Q6ZR08 3092 aa18.85■□□□□ 0.61
ERCC2-202ENST00000391942 PVALEFA0A1B0GWK0 134 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 FRMD3A2A2Y4 597 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 GAS2O43903 313 aaKnown RBP18.84■□□□□ 0.61
ERCC2-202ENST00000391942 VTNP04004 478 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 COL6A1P12109 1028 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 TMOD1P28289 359 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 ARL2P36404 184 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 SARSP49591 514 aaKnown RBP18.84■□□□□ 0.61
ERCC2-202ENST00000391942 PEX3P56589 373 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 PTPN11Q06124 597 aaPredicted RBP18.84■□□□□ 0.61
ERCC2-202ENST00000391942 ODR4Q5SWX8 454 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 IER5Q5VY09 327 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 RHPN2Q8IUC4 686 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 KIAA0319LQ8IZA0 1049 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 DNAJB3Q8WWF6 145 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 PSPC1Q8WXF1 523 aaKnown RBP18.84■□□□□ 0.61
ERCC2-202ENST00000391942 CCDC47Q96A33 483 aaKnown RBP18.84■□□□□ 0.61
ERCC2-202ENST00000391942 GSDMAQ96QA5 445 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 C11orf49Q9H6J7 331 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 NOD1Q9Y239 953 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 SMIM35A0A1B0GVV1 85 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 B4GALT4O60513 344 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 PLS3P13797 630 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 GAP43P17677 238 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 GLRA2P23416 452 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 ZNF131P52739 623 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 TMEM62Q0P6H9 643 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 NT5DC1Q5TFE4 455 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 SLC39A5Q6ZMH5 540 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 CTAGE1Q96RT6 745 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 MAP7D2Q96T17 732 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 RMND1Q9NWS8 449 aa18.84■□□□□ 0.61
ERCC2-202ENST00000391942 CCDC169A6NNP5 214 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 PQBP1O60828 265 aaKnown RBP18.83■□□□□ 0.6
ERCC2-202ENST00000391942 SRGAP2CP0DJJ0 459 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 CDK7P50613 346 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 LAMTOR4Q0VGL1 99 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 KCNB1Q14721 858 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 SMYD4Q8IYR2 804 aaPredicted RBP18.83■□□□□ 0.6
ERCC2-202ENST00000391942 WNT8BQ93098 351 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 IFT74Q96LB3 600 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 NLRP4Q96MN2 994 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 KIFC3Q9BVG8 833 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 FGFBP2Q9BYJ0 223 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 SLC39A2Q9NP94 309 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 LARSQ9P2J5 1176 aaKnown RBP18.83■□□□□ 0.6
ERCC2-202ENST00000391942 GDAQ9Y2T3 454 aa18.83■□□□□ 0.6
ERCC2-202ENST00000391942 LRRIQ4A6NIV6 560 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 SLC16A4O15374 487 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 RHOBTB3O94955 611 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 LETM1O95202 739 aaPredicted RBP18.82■□□□□ 0.6
ERCC2-202ENST00000391942 NMT1P30419 496 aaKnown RBP18.82■□□□□ 0.6
ERCC2-202ENST00000391942 NPTX2P47972 431 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 EHHADHQ08426 723 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 DMP1Q13316 513 aaPredicted RBP18.82■□□□□ 0.6
ERCC2-202ENST00000391942 CAPSQ13938 189 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 FAM26FQ5R3K3 315 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 SASS6Q6UVJ0 657 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 NECAB2Q7Z6G3 386 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 SERINC5Q86VE9 423 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
ERCC2-202ENST00000391942 GLIS3Q8NEA6 775 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms