RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 XPO6Q96QU8 1125 aaKnown RBP19.55■□□□□ 0.72
ERCC2-201ENST00000391941 NT5C3AQ9H0P0 336 aa19.55■□□□□ 0.72
ERCC2-201ENST00000391941 PCDHA1Q9Y5I3 950 aa19.55■□□□□ 0.72
ERCC2-201ENST00000391941 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 PLCG2P16885 1265 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 HOXA7P31268 230 aaPredicted RBP19.54■□□□□ 0.72
ERCC2-201ENST00000391941 CLK2P49760 499 aaKnown RBP19.54■□□□□ 0.72
ERCC2-201ENST00000391941 CTTNQ14247 550 aaKnown RBP19.54■□□□□ 0.72
ERCC2-201ENST00000391941 CBWD6Q4V339 395 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 CBWD3Q5JTY5 395 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 CBWD5Q5RIA9 395 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 OLIG1Q8TAK6 271 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 SLC20A1Q8WUM9 679 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 VIMP08670 466 aaKnown RBP19.54■□□□□ 0.72
ERCC2-201ENST00000391941 NOVP48745 357 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 DDR1Q08345 913 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 TCP10Q12799 353 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 CCT6BQ92526 530 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 NARFQ9UHQ1 456 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 AMFRQ9UKV5 643 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 TISP43B9A030 160 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 FAM86B1E9PN63 330 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 FAM86B2P0C5J1 330 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 SPATA31C1P0DKV0 1188 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 DRAP1Q14919 205 aaPredicted RBP19.54■□□□□ 0.72
ERCC2-201ENST00000391941 QRICH1Q2TAL8 776 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 ASPRV1Q53RT3 343 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 EIF1ADQ8N9N8 165 aaKnown RBP19.54■□□□□ 0.72
ERCC2-201ENST00000391941 ADAM7Q9H2U9 754 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 SUFUQ9UMX1 484 aa19.54■□□□□ 0.72
ERCC2-201ENST00000391941 POU5F1Q01860 360 aaKnown RBP19.53■□□□□ 0.72
ERCC2-201ENST00000391941 HYIQ5T013 277 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 C10orf76Q5T2E6 689 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 TAX1BP1Q86VP1 789 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 ZC3H3Q8IXZ2 948 aaKnown RBP19.53■□□□□ 0.72
ERCC2-201ENST00000391941 HES6Q96HZ4 224 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 CALR3Q96L12 384 aaKnown RBP19.53■□□□□ 0.72
ERCC2-201ENST00000391941 ANO3Q9BYT9 981 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 ABCF3Q9NUQ8 709 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 MCM8Q9UJA3 840 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 DAGLAQ9Y4D2 1042 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 KDM3AQ9Y4C1 1321 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 C6orf229H3BNL8 230 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 EML1O00423 815 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 BIRC3Q13489 604 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 IFI16Q16666 785 aaKnown RBP19.53■□□□□ 0.72
ERCC2-201ENST00000391941 KIF2BQ8N4N8 673 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 CCDC26Q8TAB7 109 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 CHMP6Q96FZ7 201 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 AGAP1Q9UPQ3 857 aa19.53■□□□□ 0.72
ERCC2-201ENST00000391941 BHMG1C9JSJ3 638 aaPredicted RBP19.52■□□□□ 0.72
ERCC2-201ENST00000391941 DDX3YO15523 660 aaKnown RBP19.52■□□□□ 0.72
ERCC2-201ENST00000391941 MRPL12P52815 198 aaKnown RBP19.52■□□□□ 0.72
ERCC2-201ENST00000391941 EDRF1Q3B7T1 1238 aa19.52■□□□□ 0.72
ERCC2-201ENST00000391941 SEPT14Q6ZU15 432 aa19.52■□□□□ 0.72
ERCC2-201ENST00000391941 SGSM3Q96HU1 749 aa19.52■□□□□ 0.72
ERCC2-201ENST00000391941 SH2D3AQ9BRG2 576 aa19.52■□□□□ 0.72
ERCC2-201ENST00000391941 GGA2Q9UJY4 613 aa19.52■□□□□ 0.72
ERCC2-201ENST00000391941 SRRM3A6NNA2 597 aaPredicted RBP19.52■□□□□ 0.71
ERCC2-201ENST00000391941 NFIAQ12857 509 aa19.52■□□□□ 0.71
ERCC2-201ENST00000391941 PRCCQ92733 491 aaPredicted RBP19.52■□□□□ 0.71
ERCC2-201ENST00000391941 DNAJC12Q9UKB3 198 aa19.52■□□□□ 0.71
ERCC2-201ENST00000391941 A8MUI8 341 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 ZBTB5O15062 677 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 CALCAP01258 141 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 NF2P35240 595 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 JAM2P57087 298 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 PREPLQ4J6C6 727 aaPredicted RBP19.51■□□□□ 0.71
ERCC2-201ENST00000391941 TTC27Q6P3X3 843 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 STAMBPL1Q96FJ0 436 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 USP40Q9NVE5 1235 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 POLLQ9UGP5 575 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 BZW2Q9Y6E2 419 aaKnown RBP19.51■□□□□ 0.71
ERCC2-201ENST00000391941 TGFB1I1O43294 461 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 SNHG28P0DPA3 235 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 ELF1P32519 619 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 PMS2P54278 862 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 ZDHHC24Q6UX98 284 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 SLFN11Q7Z7L1 901 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 BANK1Q8NDB2 785 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 THOC1Q96FV9 657 aaKnown RBP19.51■□□□□ 0.71
ERCC2-201ENST00000391941 PWWP2AQ96N64 755 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 ZDHHC18Q9NUE0 388 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.711e-9■□□□□ 10.7
ERCC2-201ENST00000391941 SUCLA2Q9P2R7 463 aaPredicted RBP19.51■□□□□ 0.71
ERCC2-201ENST00000391941 DAAM1Q9Y4D1 1078 aa19.51■□□□□ 0.71
ERCC2-201ENST00000391941 TRIM37O94972 964 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 TTLL1O95922 423 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 RPL21P46778 160 aaKnown RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 SPIRE1Q08AE8 756 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 GRAPQ13588 217 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 TNIP1Q15025 636 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 ERMARDQ5T6L9 678 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 MSL1Q68DK7 614 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 PHLDB2Q86SQ0 1253 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 JAMLQ86YT9 394 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 RASGEF1CQ8N431 466 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-201ENST00000391941 CTNNAL1Q9UBT7 734 aa19.5■□□□□ 0.71
ERCC2-201ENST00000391941 TRIM33Q9UPN9 1127 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms