RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 FAM118BQ9BPY3 351 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 PLA2G12BQ9BX93 195 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 TTYH3Q9C0H2 523 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 VPS37BQ9H9H4 285 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 CRYBG1Q9Y4K1 1723 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 OPHN1O60890 802 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 DNAJC8O75937 253 aaPredicted RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 CSF1RP07333 972 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ADCY7P51828 1080 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 CFAP157Q5JU67 520 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ZNF571Q7Z3V5 609 aaPredicted RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 PURBQ96QR8 312 aaKnown RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 PAPOLAP51003 745 aaKnown RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 SLMAPQ14BN4 828 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 JAMLQ86YT9 394 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 CD302Q8IX05 232 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ZNF483Q8TF39 744 aaPredicted RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 C1orf54Q8WWF1 131 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ALG13Q9NP73 1137 aaKnown RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.31
SHOX-203ENST00000381578 SLC12A6Q9UHW9 1150 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 CDK17Q00537 523 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 KCNMA1Q12791 1236 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 ERMARDQ5T6L9 678 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 ERP44Q9BS26 406 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 SLITRK6Q9H5Y7 841 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
SHOX-203ENST00000381578 NAGPAQ9UK23 515 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 USTQ9Y2C2 406 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 ARL2BPQ9Y2Y0 163 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 CAMTA2O94983 1202 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 FAM13AO94988 1023 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 UCHL3P15374 230 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 RPL13P26373 211 aaKnown RBP13.1□□□□□ -0.31
SHOX-203ENST00000381578 CNGA1P29973 690 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 MTM1Q13496 603 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 FIGNQ5HY92 759 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 CCDC137Q6PK04 289 aaKnown RBP13.1□□□□□ -0.31
SHOX-203ENST00000381578 GBP7Q8N8V2 638 aaPredicted RBP13.1□□□□□ -0.31
SHOX-203ENST00000381578 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 LRRC8CQ8TDW0 803 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 BAP1Q92560 729 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 LRRC37BQ96QE4 947 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 C7orf25Q9BPX7 421 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 MAGEF1Q9HAY2 307 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 ADAMTS7Q9UKP4 1686 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 DNAJC3Q13217 504 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 KYNUQ16719 465 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 CENPPQ6IPU0 288 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 C6orf89Q6UWU4 347 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 TPTE2Q6XPS3 522 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 SLC35G2Q8TBE7 412 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
SHOX-203ENST00000381578 TXLNGQ9NUQ3 528 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 DDX25Q9UHL0 483 aaKnown RBP13.1□□□□□ -0.31
SHOX-203ENST00000381578 LTBP4Q8N2S1 1624 aa13.1□□□□□ -0.31
SHOX-203ENST00000381578 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 POTECB2RU33 542 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 MGRN1O60291 552 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 TLR2O60603 784 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 GNA14O95837 355 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 UBTFL6P0CB48 400 aaPredicted RBP13.09□□□□□ -0.31
SHOX-203ENST00000381578 KLC1Q07866 573 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 SEPT2Q15019 361 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 DIXDC1Q155Q3 683 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 PTF1AQ7RTS3 328 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 PDCD7Q8N8D1 485 aaKnown RBP13.09□□□□□ -0.31
SHOX-203ENST00000381578 CFAP61Q8NHU2 1237 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 ETAA1Q9NY74 926 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 NR2E1Q9Y466 385 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 A0A0G2JND7 137 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 ZCCHC18P0CG32 403 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 SLC16A2P36021 539 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 RFC5P40937 340 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
SHOX-203ENST00000381578 IL9RQ01113 521 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 HS2ST1Q7LGA3 356 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 MREGQ8N565 214 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 MYCT1Q8N699 235 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 C9orf72Q96LT7 481 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 NUDT12Q9BQG2 462 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 NT5C3AQ9H0P0 336 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 DCP1AQ9NPI6 582 aaPredicted RBP13.09□□□□□ -0.31
SHOX-203ENST00000381578 CTNNAL1Q9UBT7 734 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 RASA4BC9J798 803 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 RASA4O43374 803 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 IFNB1P01574 187 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 PLA2G4BP0C869 781 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 SERPINB4P48594 390 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 MECOMQ03112 1051 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 HEMGNQ9BXL5 484 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 ZNF287Q9HBT7 754 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 LRRC4CQ9HCJ2 640 aa13.09□□□□□ -0.31
SHOX-203ENST00000381578 PARP2Q9UGN5 583 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms