RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ZNF618Q5T7W0 954 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 TRAF7Q6Q0C0 670 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 GPBP1Q86WP2 473 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 MAP7D2Q96T17 732 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 GPRC5CQ9NQ84 441 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 PRDM5Q9NQX1 630 aaPredicted RBP17.17■□□□□ 0.34
PDGFB-202ENST00000381551 UMODL1Q5DID0 1318 aa17.17■□□□□ 0.34
PDGFB-202ENST00000381551 LOXHD1Q8IVV2 1947 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 NPHP3-ACAD11A0A0J9YXS1 232 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 MYMKA6NI61 221 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 ASAP2O43150 1006 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 CHRNA1P02708 482 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 VTNP04004 478 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 IQCF3P0C7M6 154 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 SELPP16109 830 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 LIG1P18858 919 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 CYP2C18P33260 490 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 MRPS6P82932 125 aaKnown RBP17.16■□□□□ 0.34
PDGFB-202ENST00000381551 CDC42EP1Q00587 391 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 FAM102BQ5T8I3 360 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 KSR1Q8IVT5 923 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 ZNF710Q8N1W2 664 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 PSPC1Q8WXF1 523 aaKnown RBP17.16■□□□□ 0.34
PDGFB-202ENST00000381551 STAMQ92783 540 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 TIPINQ9BVW5 301 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 CELF4Q9BZC1 486 aaKnown RBP17.16■□□□□ 0.34
PDGFB-202ENST00000381551 PPP1R12CQ9BZL4 782 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 TNMDQ9H2S6 317 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 MAGEF1Q9HAY2 307 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 PRKAG2Q9UGJ0 569 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 AKT3Q9Y243 479 aa17.16■□□□□ 0.34
PDGFB-202ENST00000381551 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 GOLGA6L22H0YM25 854 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 GPR32O75388 356 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 RAG1P15918 1043 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 NLRP11P59045 1033 aaKnown RBP17.15■□□□□ 0.34
PDGFB-202ENST00000381551 AMPD3Q01432 767 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 MGAT3Q09327 533 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 RAD51AP2Q09MP3 1159 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 LAMTOR4Q0VGL1 99 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 MAPK7Q13164 816 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 GIT2Q14161 759 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 MXD4Q14582 209 aaPredicted RBP17.15■□□□□ 0.34
PDGFB-202ENST00000381551 KRBA2Q6ZNG9 492 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 RHPN2Q8IUC4 686 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 CEP57L1Q8IYX8 460 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 DAW1Q8N136 415 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 KIFAP3Q92845 792 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 PAGE5Q96GU1 130 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 LRRC27Q9C0I9 530 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 POLR3FQ9H1D9 316 aaPredicted RBP17.15■□□□□ 0.34
PDGFB-202ENST00000381551 WNT8AQ9H1J5 351 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 ADAMTS10Q9H324 1103 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 CDHR5Q9HBB8 845 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 NR2E3Q9Y5X4 410 aa17.15■□□□□ 0.34
PDGFB-202ENST00000381551 SFI1A8K8P3 1242 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 HIP1RO75146 1068 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 NR1I2O75469 434 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 CTSHP09668 335 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 GLRA2P23416 452 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 GPC3P51654 580 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 CCL23P55773 120 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 GPNMBQ14956 572 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 MFSD5Q6N075 450 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 LRRC8DQ7L1W4 858 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 DYMQ7RTS9 669 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 CNNM3Q8NE01 707 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 ASAP3Q8TDY4 903 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 DDX12PQ92771 950 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 DNAJC19Q96DA6 116 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 C7orf25Q9BPX7 421 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 REEP2Q9BRK0 252 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 CDY2AQ9Y6F7 541 aa17.14■□□□□ 0.33
PDGFB-202ENST00000381551 KRT18P05783 430 aaKnown RBP17.13■□□□□ 0.33
PDGFB-202ENST00000381551 SRGAP2CP0DJJ0 459 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 SYN1P17600 705 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 AFMP43652 599 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 CRYBB1P53674 252 aaPredicted RBP17.13■□□□□ 0.33
PDGFB-202ENST00000381551 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
PDGFB-202ENST00000381551 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 MBTPS1Q14703 1052 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 KIZQ2M2Z5 673 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 CNNM4Q6P4Q7 775 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 BSNDQ8WZ55 320 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 SCLYQ96I15 445 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 ZNF668Q96K58 619 aaPredicted RBP17.13■□□□□ 0.33
PDGFB-202ENST00000381551 DRC1Q96MC2 740 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 PPP1R16BQ96T49 567 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 TRIM9Q9C026 710 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 C17orf75Q9HAS0 396 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 ODF2LQ9ULJ1 636 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 ZMYND8Q9ULU4 1186 aaPredicted RBP17.13■□□□□ 0.33
PDGFB-202ENST00000381551 TRPV2Q9Y5S1 764 aa17.13■□□□□ 0.33
PDGFB-202ENST00000381551 A0A087WZ62 844 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 M0QZ92 97 aa17.12■□□□□ 0.33
PDGFB-202ENST00000381551 PARNO95453 639 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms