RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 SMIM5Q71RC9 77 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 RPUSD2Q8IZ73 545 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 SCYL3Q8IZE3 742 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 INTS2Q9H0H0 1204 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 CAPN6Q9Y6Q1 641 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 TCRBV5S4A2TA0A5A2 114 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 ARHGAP42A6NI28 874 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 GOLGA8SH3BPF8 625 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 H7C0C1 242 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 ZRANB2O95218 330 aaKnown RBP eCLIP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 PEX19P40855 299 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 ATP5OP48047 213 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 EDRF1Q3B7T1 1238 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 DNAJC24Q6P3W2 148 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM160B2Q86V87 743 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 ANKS1AQ92625 1134 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 N4BP2L2Q92802 583 aaPredicted RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 EHD2Q9NZN4 543 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 DMGDHQ9UI17 866 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 LSP1P33241 339 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 GALCP54803 685 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 FIGNQ5HY92 759 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 EARS2Q5JPH6 523 aaKnown RBP13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 CCHCR1Q8TD31 782 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 PITPNM3Q9BZ71 974 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 FLT1P17948 1338 aa13.68□□□□□ -0.22
DNMT3A-204ENST00000380756 TTI1O43156 1089 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 SLC9A1P19634 815 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 SARNPP82979 210 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 NAB2Q15742 525 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 EIF2AK1Q9BQI3 630 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF446Q9NWS9 450 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 RAD51CO43502 376 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 PDHBP11177 359 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 GPSM2P81274 684 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 RNASELQ05823 741 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 PPP1R2P3Q6NXS1 205 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 RGL1Q9NZL6 768 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 MAD1L1Q9Y6D9 718 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM237AA0A1B0GTK4 181 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF233A6NK53 670 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 SASH3O75995 380 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 HDLBPQ00341 1268 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 CCDC137Q6PK04 289 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 SRRM1Q8IYB3 904 aaKnown RBP13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 METTL13Q8N6R0 699 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 MLXIPLQ9NP71 852 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 RAB21Q9UL25 225 aa13.67□□□□□ -0.22
DNMT3A-204ENST00000380756 EYA4O95677 639 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 BAG2O95816 211 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 ANXA13P27216 316 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 NMT1P30419 496 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 MSH2P43246 934 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 FXR2P51116 673 aaKnown RBP eCLIP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 VAMP7P51809 220 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 DYNLT1P63172 113 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 ACTN3Q08043 901 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF564Q8TBZ8 553 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF473Q8WTR7 871 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 ESYT2A0FGR8 921 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 RNF207Q6ZRF8 634 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 FAM47EQ6ZV65 393 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 DAGLBQ8NCG7 672 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 NRBP2Q9NSY0 501 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 PFASO15067 1338 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 BMP6P22004 513 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 CORO7P57737 925 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 HERVK_113P62684 666 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 BYSLQ13895 437 aaKnown RBP13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 NFIXQ14938 502 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 FBXW10Q5XX13 1052 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 C16orf86Q6ZW13 317 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 MAP7D3Q8IWC1 876 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 MIS12Q9H081 205 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 AS3MTQ9HBK9 375 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 ADAM22Q9P0K1 906 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 TTC16Q8NEE8 873 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 PPP4R1Q8TF05 950 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 GOLPH3Q9H4A6 298 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
DNMT3A-204ENST00000380756 A0A087X0B3 334 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 RASA4BC9J798 803 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 RASA4O43374 803 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 BRAFP15056 766 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 NPR1P16066 1061 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 SEC24CP53992 1094 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 YARSP54577 528 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 BBS9Q3SYG4 887 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 ZNF449Q6P9G9 518 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 DDX42Q86XP3 938 aaKnown RBP eCLIP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 USP38Q8NB14 1042 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 OR2W6PQ8NHA6 318 aa13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 CALR3Q96L12 384 aaKnown RBP13.65□□□□□ -0.22
DNMT3A-204ENST00000380756 GBP5Q96PP8 586 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms