RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 SNX3O60493 162 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PBX1P40424 430 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 TXKP42681 527 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 COG7P83436 770 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 OCRLQ01968 901 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 ZBTB17Q13105 803 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 METTL16Q86W50 562 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 FOXP4Q8IVH2 680 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 FAM13CQ8NE31 585 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 GAB3Q8WWW8 586 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 NEUROD6Q96NK8 337 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 STK33Q9BYT3 514 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 DCLRE1BQ9H816 532 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 GIT1Q9Y2X7 761 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 TTC34A8MYJ7 566 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PEX14O75381 377 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 EMP3P54852 163 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 HS2ST1Q7LGA3 356 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 GRAMD2AQ8IUY3 354 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 SEZ6LQ9BYH1 1024 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 METTL5Q9NRN9 209 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 SELENONQ9NZV5 590 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 ADD3Q9UEY8 706 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 ASAP1Q9ULH1 1129 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PPME1Q9Y570 386 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 SPATA31A1Q5TZJ5 1347 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 ABCC12Q96J65 1359 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 CCDC160A6NGH7 325 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 RNF225M0QZC1 329 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 KCNQ2O43526 872 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 DGKIO75912 1065 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 LDHBP07195 334 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PABPC4LP0CB38 370 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 SLC16A2P36021 539 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 RGS2P41220 211 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 KRT83P78385 493 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PPP2R2DQ66LE6 453 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 CCDC174Q6PII3 467 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 ANO5Q75V66 913 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 ESX1Q8N693 406 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 LRRC45Q96CN5 670 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PPP1R10Q96QC0 940 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 FAF1Q9UNN5 650 aaPredicted RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 HBS1LQ9Y450 684 aaKnown RBP10.07□□□□□ -0.8
PTPRA-204ENST00000380393 PASKQ96RG2 1323 aa10.07□□□□□ -0.8
PTPRA-204ENST00000380393 MYH1P12882 1939 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 OPHN1O60890 802 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 HSPA1AP0DMV8 641 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 HSPA1BP0DMV9 641 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MZF1P28698 734 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 NAA20P61599 178 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 TRADDQ15628 312 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 RESP18Q5W5W9 173 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 NFRKBQ6P4R8 1299 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 ZNF790Q6PG37 636 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 C1orf228Q6PIY5 440 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 STOX1Q6ZVD7 989 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MORC4Q8TE76 937 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 LBHD1Q9BQE6 289 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 FHDC1Q9C0D6 1143 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 LACRTQ9GZZ8 138 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 ASCC2Q9H1I8 757 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 INTS9Q9NV88 658 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.06□□□□□ -0.84e-8■■■■□ 19.8
PTPRA-204ENST00000380393 IL1RAPL1Q9NZN1 696 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 ARIH1Q9Y4X5 557 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MYH10P35580 1976 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 RASA4BC9J798 803 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 RASA4O43374 803 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MARCH6O60337 910 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 STAM2O75886 525 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 STX17P56962 302 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 WASHC5Q12768 1159 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 WDR45BQ5MNZ6 344 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 ZNF572Q7Z3I7 529 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 FITM2Q8N6M3 262 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 FBXO41Q8TF61 875 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 PRPF31Q8WWY3 499 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 GFM2Q969S9 779 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 DCAF5Q96JK2 942 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 PRMT1Q99873 361 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MTFR1LQ9H019 292 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 ALDH8A1Q9H2A2 487 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 POLR3EQ9NVU0 708 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MAN1B1Q9UKM7 699 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 H0YGN5 161 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 CBFA2T3O75081 653 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 LMNAP02545 664 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 TCP1P17987 556 aaKnown RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 PHLDB2Q86SQ0 1253 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MARCH10Q8NA82 808 aaPredicted RBP10.06□□□□□ -0.8
PTPRA-204ENST00000380393 STARD8Q92502 1023 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 NFS1Q9Y697 457 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 DUSP10Q9Y6W6 482 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 MROH7Q68CQ1 1323 aa10.06□□□□□ -0.8
PTPRA-204ENST00000380393 GOLGA8TH3BQL2 631 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 TNFRSF10AO00220 468 aa10.05□□□□□ -0.8
PTPRA-204ENST00000380393 FOXN1O15353 648 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms