RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 DEFB128Q7Z7B8 93 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 USP38Q8NB14 1042 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 MCPH1Q8NEM0 835 aa20.84■□□□□ 0.93
SSU72-203ENST00000378725 PRPF31Q8WWY3 499 aaKnown RBP20.84■□□□□ 0.93
SSU72-203ENST00000378725 PSPC1Q8WXF1 523 aaKnown RBP20.84■□□□□ 0.93
SSU72-203ENST00000378725 PLA2G4BP0C869 781 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 LPIN1Q14693 890 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 PLEKHG4Q58EX7 1191 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 RRAGBQ5VZM2 374 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 RINT1Q6NUQ1 792 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 CHRDL2Q6WN34 429 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 C1orf186Q6ZWK4 172 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 ZNF365Q70YC5 407 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 RAD54LQ92698 747 aa20.83■□□□□ 0.93
SSU72-203ENST00000378725 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.83■□□□□ 0.93
SSU72-203ENST00000378725 BMP2KQ9NSY1 1161 aaPredicted RBP20.83■□□□□ 0.93
SSU72-203ENST00000378725 FGBP02675 491 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 LAMTOR4Q0VGL1 99 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 MXD4Q14582 209 aaPredicted RBP20.82■□□□□ 0.92
SSU72-203ENST00000378725 NAALADL2Q58DX5 795 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 RESP18Q5W5W9 173 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 PSRC1Q6PGN9 363 aaPredicted RBP20.82■□□□□ 0.92
SSU72-203ENST00000378725 ZNF410Q86VK4 478 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 RHPN2Q8IUC4 686 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 RASSF8Q8NHQ8 419 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 STK17AQ9UEE5 414 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 COL4A3BPQ9Y5P4 624 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 PDE4DIPQ5VU43 2346 aa20.82■□□□□ 0.92
SSU72-203ENST00000378725 A0A087X0B3 334 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 GHRP10912 638 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 CMA1P23946 247 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 POU5F1BQ06416 359 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 SHHQ15465 462 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 CNKSR3Q6P9H4 555 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 CCDC73Q6ZRK6 1079 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 TSHZ1Q6ZSZ6 1077 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 KSR1Q8IVT5 923 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 DBF4BQ8NFT6 615 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 TMEM40Q8WWA1 233 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 HERVK_113Q902F9 699 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 PPP1R16BQ96T49 567 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 OSMRQ99650 979 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 RUSC1Q9BVN2 902 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 AGO3Q9H9G7 860 aaKnown RBP20.81■□□□□ 0.92
SSU72-203ENST00000378725 KCND2Q9NZV8 630 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 GINS2Q9Y248 185 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 TANC1Q9C0D5 1861 aa20.81■□□□□ 0.92
SSU72-203ENST00000378725 DARSP14868 501 aaKnown RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 GLRA2P23416 452 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 EIF4BP23588 611 aaKnown RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 GUCY2CP25092 1073 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 MCM6Q14566 821 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 TCTN1Q2MV58 587 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 ARSHQ5FYA8 562 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 C9orf50Q5SZB4 431 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 RASIP1Q5U651 963 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 FAM43BQ6ZT52 329 aaPredicted RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 MAEAQ7L5Y9 396 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 ASAP3Q8TDY4 903 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 SEPT8Q92599 483 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 LARP4BQ92615 738 aaKnown RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 APBB2Q92870 758 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 TIPINQ9BVW5 301 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 PANK2Q9BZ23 570 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 POLR3FQ9H1D9 316 aaPredicted RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 IFT122Q9HBG6 1241 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 GDPD2Q9HCC8 539 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 GPRC5CQ9NQ84 441 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 FAM13BQ9NYF5 915 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 COLQQ9Y215 455 aaPredicted RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 NOC2LQ9Y3T9 749 aaKnown RBP20.8■□□□□ 0.92
SSU72-203ENST00000378725 ARID2Q68CP9 1835 aa20.8■□□□□ 0.92
SSU72-203ENST00000378725 A0A087WZ62 844 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 A0A1W2PQ27 194 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 A0A1W2PQ64 194 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 A0A1W2PQD8 194 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 SSBP05455 408 aaKnown RBP eCLIP20.79■□□□□ 0.92
SSU72-203ENST00000378725 ACTN1P12814 892 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 E2F4Q16254 413 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 FAM102BQ5T8I3 360 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 NLRP7Q8WX94 980 aa20.79■□□□□ 0.92
SSU72-203ENST00000378725 ZNF668Q96K58 619 aaPredicted RBP20.79■□□□□ 0.92
SSU72-203ENST00000378725 FDXACB1Q9BRP7 624 aaPredicted RBP20.79■□□□□ 0.92
SSU72-203ENST00000378725 IFIH1Q9BYX4 1025 aaKnown RBP20.79■□□□□ 0.92
SSU72-203ENST00000378725 GCOM2Q9BZD3 368 aaPredicted RBP20.79■□□□□ 0.92
SSU72-203ENST00000378725 EVPLQ92817 2033 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 FAM237AA0A1B0GTK4 181 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 A0A1W2PPC1 479 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 RBAK-RBAKDNI3L0D1 243 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 RPS6KA5O75582 802 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 BAIAP3O94812 1187 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 SRGAP2CP0DJJ0 459 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 CD52P31358 61 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 OTOP2Q7RTS6 562 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 IFNLR1Q8IU57 520 aaPredicted RBP20.78■□□□□ 0.92
SSU72-203ENST00000378725 TDHQ8IZJ6 230 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 DAW1Q8N136 415 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 KIFAP3Q92845 792 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 NLRP4Q96MN2 994 aa20.78■□□□□ 0.92
SSU72-203ENST00000378725 ERVK-5Q9HDB9 667 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms