RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 POLR3CQ9BUI4 534 aaPredicted RBP15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 FEZ2Q9UHY8 353 aaPredicted RBP15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 FZD1Q9UP38 647 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 RGPD2P0DJD1 1756 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 EMSYQ7Z589 1322 aa15.33■□□□□ 0.05
SHROOM1-203ENST00000378679 FUT2Q10981 343 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 DRAP1Q14919 205 aaPredicted RBP15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 KSR1Q8IVT5 923 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 TC2NQ8N9U0 490 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 FBXO41Q8TF61 875 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 DAPK3O43293 454 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 CLUL1Q15846 466 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 ZNF568Q3ZCX4 644 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 RSPH3Q86UC2 560 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 RPS6KC1Q96S38 1066 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 SELENOSQ9BQE4 189 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 DPH5Q9H2P9 285 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 RSPH10B2B2RC85 870 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 GOLGA8SH3BPF8 625 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 RSPH10BP0C881 870 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 MAPK4P31152 587 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 EDRF1Q3B7T1 1238 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 RINT1Q6NUQ1 792 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 ERO1BQ86YB8 467 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 CHST13Q8NET6 341 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 KRT12Q99456 494 aa15.33■□□□□ 0.04
SHROOM1-203ENST00000378679 FAM208AQ9UK61 1670 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 GOLGA6L7A0A1B0GV03 622 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 HPDP32754 393 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 C10orf76Q5T2E6 689 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 C7orf31Q8N865 590 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 RNF149Q8NC42 400 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 FAM76AQ8TAV0 307 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 MOV10L1Q9BXT6 1211 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 UNC45AQ9H3U1 944 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 XPOTO43592 962 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 RNF8O76064 485 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 MYCP01106 439 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 GUCY2DQ02846 1103 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 NCAPHQ15003 741 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 CCDC91Q7Z6B0 441 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 SYTL5Q8TDW5 730 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 NUDT12Q9BQG2 462 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 RAB17Q9H0T7 212 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 SLC26A4O43511 780 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 PRKCEQ02156 737 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 SURF1Q15526 300 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 KRT39Q6A163 491 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 XRRA1Q6P2D8 792 aa15.32■□□□□ 0.04
SHROOM1-203ENST00000378679 CCL15-CCL14A0A0B4J2E2 113 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 CCL15Q16663 113 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 EDEM3Q9BZQ6 932 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 STMN4Q9H169 189 aaPredicted RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 KCND2Q9NZV8 630 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 AGO2Q9UKV8 859 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 TACC3Q9Y6A5 838 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 RGPD1P0DJD0 1748 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 STAM2O75886 525 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 GYPCP04921 128 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 PHKA2P46019 1235 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 PPP2R5EQ16537 467 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 SHROOM1Q2M3G4 852 aaPredicted RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 MAGOHBQ96A72 148 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 PDCD2LQ9BRP1 358 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 RUSC1Q9BVN2 902 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 GLIS2Q9BZE0 524 aaPredicted RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 IQCGQ9H095 443 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 FAM204AQ9H8W3 233 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 RAB20Q9NX57 234 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 FAM86B1E9PN63 330 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 SLC25A27O95847 323 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 FAM86B2P0C5J1 330 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 EPHX2P34913 555 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 LMBRD2Q68DH5 695 aaPredicted RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 OTUD6BQ8N6M0 293 aa15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 MRRFQ96E11 262 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-203ENST00000378679 EZRP15311 586 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 GABPAQ06546 454 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 TAF1CQ15572 869 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 ZRSR2Q15696 482 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 KCNV1Q6PIU1 500 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 MED10Q9BTT4 135 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 FAN1Q9Y2M0 1017 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 EIF3CLB5ME19 914 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 ACTN1P12814 892 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 PLS3P13797 630 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 HUNKP57058 714 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 ZNF746Q6NUN9 644 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 EIF3CQ99613 913 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 KCNK9Q9NPC2 374 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 HGSO14964 777 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 TRIM66O15016 1216 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 PSMC6P62333 389 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 KAZNQ674X7 775 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 TTI2Q6NXR4 508 aa15.3■□□□□ 0.04
SHROOM1-203ENST00000378679 PDXDC1Q6P996 788 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms