RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 XRCC4Q13426 336 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 CDC37Q16543 378 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 RASSF8Q8NHQ8 419 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 TBC1D31Q96DN5 1066 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 CAPNS2Q96L46 248 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 KRT12Q99456 494 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 P2RX7Q99572 595 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 BCCIPQ9P287 314 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 MANSC4A6NHS7 340 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 PDHXO00330 501 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 BUB1O43683 1085 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 AOC2O75106 756 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 TMOD1P28289 359 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 DSG3P32926 999 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 ZKSCAN8Q15776 578 aaPredicted RBP16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 IL17AQ16552 155 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 QRICH1Q2TAL8 776 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 TTI2Q6NXR4 508 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 CCDC174Q6PII3 467 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 GPKOWQ92917 476 aaPredicted RBP eCLIP16.4■□□□□ 0.225e-9■■■■□ 21.7
CCHCR1-201ENST00000376266 MTMR8Q96EF0 704 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 RNF14Q9UBS8 474 aa16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 SEC63Q9UGP8 760 aaKnown RBP16.4■□□□□ 0.22
CCHCR1-201ENST00000376266 SPDYE16A6NNV3 312 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 BACH1O14867 736 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 ZBTB5O15062 677 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 MGRN1O60291 552 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 PPP1R11O60927 126 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 SKAP2O75563 359 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 CYP2C8P10632 490 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 TAL1P17542 331 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 TRADDQ15628 312 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 GPIHBP1Q8IV16 184 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 CNOT6LQ96LI5 555 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 NOX5Q96PH1 765 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 BAIAP2L1Q9UHR4 511 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 PLAGL2Q9UPG8 496 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 PNMA6FA0A0J9YX94 578 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 TESPA1A2RU30 521 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 IGF2BP3O00425 579 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 VWA5AO00534 786 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 PEX10O60683 326 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 SCG2P13521 617 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 SLC8A3P57103 927 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 SARNPP82979 210 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 HLTFQ14527 1009 aaKnown RBP eCLIP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 PFKFB3Q16875 520 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 LACTB2Q53H82 288 aaPredicted RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 KLHDC7AQ5VTJ3 777 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 POTEEQ6S8J3 1075 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 RANBP17Q9H2T7 1088 aaKnown RBP16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 SALL4Q9UJQ4 1053 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 RLFQ13129 1914 aa16.39■□□□□ 0.21
CCHCR1-201ENST00000376266 HSPA9P38646 679 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 CCNHP51946 323 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 PABPC4Q13310 644 aaKnown RBP eCLIP16.38■□□□□ 0.211e-8■■■□□ 17
CCHCR1-201ENST00000376266 FIGNQ5HY92 759 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 CPLX4Q7Z7G2 160 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 ANKRD23Q86SG2 305 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 DUSP9Q99956 384 aaKnown RBP16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 NOD2Q9HC29 1040 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 PLCB1Q9NQ66 1216 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 TSKSQ9UJT2 592 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 ACCSLQ4AC99 568 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 GKAP1Q5VSY0 366 aaPredicted RBP16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 LRIG3Q6UXM1 1119 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 FAM114A1Q8IWE2 563 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 CPXCR1Q8N123 301 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 OR2W6PQ8NHA6 318 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 SLC38A10Q9HBR0 1119 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 SLC12A6Q9UHW9 1150 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 PARP14Q460N5 1801 aa16.38■□□□□ 0.21
CCHCR1-201ENST00000376266 BUB1BO60566 1050 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 ATP6V1G2O95670 118 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 OSBPP22059 807 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 NOGQ13253 232 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 BIRC2Q13490 618 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 C11orf91Q3C1V1 193 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 USH1GQ495M9 461 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 PIK3AP1Q6ZUJ8 805 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 TAX1BP1Q86VP1 789 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 COA7Q96BR5 231 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 ERGIC2Q96RQ1 377 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 ADAMTS5Q9UNA0 930 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 DNAJC8O75937 253 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 GCKP35557 465 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 RNASE9P60153 205 aaKnown RBP16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 ELF3P78545 371 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 KCNB1Q14721 858 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 HIBCHQ6NVY1 386 aaPredicted RBP16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 ARMC2Q8NEN0 867 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 RAPGEF5Q92565 580 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 P3H4Q92791 437 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 TNFRSF25Q93038 417 aa16.37■□□□□ 0.21
CCHCR1-201ENST00000376266 DHTKD1Q96HY7 919 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms