RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 K7ERI5 159 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 QRICH1Q2TAL8 776 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 FAM160B2Q86V87 743 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 TRIM59Q8IWR1 403 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 KCTD6Q8NC69 237 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 CALR3Q96L12 384 aaKnown RBP12.37□□□□□ -0.43
PTCH1-203ENST00000375274 TRIM55Q9BYV6 548 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 IQANK1A0A1B0GTG1 560 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 CLGNO14967 610 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 ATP5HO75947 161 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 TRIM49P0CI25 452 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 TRIM49CP0CI26 452 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 ACTN1P12814 892 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 NR1H3Q13133 447 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 BYSLQ13895 437 aaKnown RBP12.37□□□□□ -0.43
PTCH1-203ENST00000375274 PADI6Q6TGC4 694 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 EPM2AIP1Q7L775 607 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-203ENST00000375274 FRMD5Q7Z6J6 570 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 SYT2Q8N9I0 419 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-203ENST00000375274 SYNJ2BP-COX16A0A087WUM0 186 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 APBA3O96018 575 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 CACNB3P54284 484 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 DHX34Q14147 1143 aaKnown RBP12.37□□□□□ -0.43
PTCH1-203ENST00000375274 LRRC14Q15048 493 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 MMEL1Q495T6 779 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 BRINP3Q76B58 766 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 MAML1Q92585 1016 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 COX16Q9P0S2 106 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 MAP3K7O43318 606 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 RPS6KA4O75676 772 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 STAT3P40763 770 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 PARP9Q8IXQ6 854 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 NLRP7Q8WX94 980 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 RBM41Q96IZ5 413 aaKnown RBP12.37□□□□□ -0.43
PTCH1-203ENST00000375274 LRRC37BQ96QE4 947 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 PNKPQ96T60 521 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
PTCH1-203ENST00000375274 PFASO15067 1338 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 TOM1L1O75674 476 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 GSTA1P08263 222 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 GSTA2P09210 222 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 PRELPP51888 382 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 FAM182BQ5T319 152 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 PCGF5Q86SE9 256 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 TTC17Q96AE7 1141 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 SMARCAL1Q9NZC9 954 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 INTUQ9ULD6 942 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 PDXKO00764 312 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 KRT37O76014 449 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 CA8P35219 290 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 ECE1P42892 770 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 CARSP49589 748 aaKnown RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 POLE2P56282 527 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 TFDP1Q14186 410 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 FBXW10Q5XX13 1052 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 ERICH1Q86X53 443 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 ADGRF4Q8IZF3 695 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 ZNF473Q8WTR7 871 aaKnown RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 DYDC2Q96IM9 177 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 NUP85Q9BW27 656 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 ZNF277Q9NRM2 450 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 NARFQ9UHQ1 456 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 L1RE1Q9UN81 338 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 AK9Q5TCS8 1911 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 GYG2O15488 501 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 MED7O43513 233 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 LSP1P33241 339 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 SOX5P35711 763 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 USP11P51784 963 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 VAMP7P51809 220 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 CCNYQ8ND76 341 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 INTS2Q9H0H0 1204 aaKnown RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 SMYD2Q9NRG4 433 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 PDS5AQ29RF7 1337 aaKnown RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 CFAP73A6NFT4 308 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 MYMKA6NI61 221 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 ARL4CP56559 192 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 IGBP1P78318 339 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 NCAPHQ15003 741 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 RAPH1Q70E73 1250 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 C11orf70Q9BRQ4 267 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 CSADQ9Y600 493 aa12.36□□□□□ -0.43
PTCH1-203ENST00000375274 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
PTCH1-203ENST00000375274 FAM196BA6NMK8 535 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 TTI1O43156 1089 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 PDXDC2PQ6P474 469 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 WNT8AQ9H1J5 351 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 STOML1Q9UBI4 398 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ANGPTL2Q9UKU9 493 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 TFR2Q9UP52 801 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 PRPSAP2O60256 369 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 UCHL3P15374 230 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 DRP2Q13474 957 aa12.35□□□□□ -0.43
PTCH1-203ENST00000375274 ATG16L1Q676U5 607 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms