RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 KIFAP3Q92845 792 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 KIFC3Q9BVG8 833 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 SLC5A4Q9NY91 659 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 MAGEC2Q9UBF1 373 aaPredicted RBP17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 PCDHB13Q9Y5F0 798 aa17.29■□□□□ 0.36
NIPAL3-204ENST00000374399 TNPO2O14787 897 aaKnown RBP17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 SLC16A4O15374 487 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 TPM3P06753 285 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 HOXD8P13378 290 aaPredicted RBP17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 CYP2B6P20813 491 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 NR2F2P24468 414 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 CYP2C19P33261 490 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 GOLGA8FQ08AF8 430 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 GOLGA8DPQ0D2H9 430 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 ADAM9Q13443 819 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 NFIL3Q16649 462 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 FILIP1LQ4L180 1135 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 OLFML2BQ68BL8 750 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 PPTC7Q8NI37 304 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 ATP8B4Q8TF62 1192 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 SPIRE2Q8WWL2 714 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 BBXQ8WY36 941 aaPredicted RBP17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 GLG1Q92896 1179 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 AZI2Q9H6S1 392 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 NRBP2Q9NSY0 501 aa17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 ZHX1Q9UKY1 873 aaPredicted RBP17.28■□□□□ 0.36
NIPAL3-204ENST00000374399 ESPNB1AK53 854 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 CLIC2O15247 247 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 MAFO75444 373 aaPredicted RBP17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 FGFR1OPO95684 399 aaKnown RBP17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 NR3C1P04150 777 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 ARL2P36404 184 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 RGS2P41220 211 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 APLP1P51693 650 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 IRF5Q13568 498 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 IQSEC1Q6DN90 963 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 ANKRD20A12PQ8NF67 263 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 SOCS4Q8WXH5 440 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 APBA2Q99767 749 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 POLR3FQ9H1D9 316 aaPredicted RBP17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 C17orf75Q9HAS0 396 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 DMAC2Q9NW81 257 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 GNEQ9Y223 722 aaKnown RBP17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 SIP14410 1827 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 CENPFP49454 3210 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 ITIH6Q6UXX5 1313 aa17.27■□□□□ 0.36
NIPAL3-204ENST00000374399 TISP43B9A030 160 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 CALUO43852 315 aaPredicted RBP17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 AKAP3O75969 853 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 ALDH1A1P00352 501 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 LGALS2P05162 132 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 PRKCSHP14314 528 aaPredicted RBP17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 MTIF2P46199 727 aaKnown RBP17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 CCZ1BP86790 482 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 CCZ1P86791 482 aaPredicted RBP17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 MKRN4PQ13434 485 aaPredicted RBP17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 DRP2Q13474 957 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 TAS1R3Q7RTX0 852 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 ASAP3Q8TDY4 903 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 TMEM143Q96AN5 459 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 FAM167AQ96KS9 214 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 C16orf70Q9BSU1 422 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 RNPEPQ9H4A4 650 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 SMARCAD1Q9H4L7 1026 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 AGPAT3Q9NRZ7 376 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 PYCARDQ9ULZ3 195 aa17.27■□□□□ 0.35
NIPAL3-204ENST00000374399 IGKV6-21A0A0C4DH24 114 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 GLRA2P23416 452 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 RFC5P40937 340 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 CASP4P49662 377 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 POLGP54098 1239 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 GSDMDP57764 484 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 LACTBP83111 547 aaPredicted RBP17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 UBXN1Q04323 297 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 ALCAMQ13740 583 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 TRIM59Q8IWR1 403 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 BORCS6Q96GS4 357 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 NOC4LQ9BVI4 516 aaKnown RBP17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 GBP3Q9H0R5 595 aa17.26■□□□□ 0.35
NIPAL3-204ENST00000374399 RNF225M0QZC1 329 aaPredicted RBP17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 CETN3O15182 167 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 PSMC4P43686 418 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 SLC26A2P50443 739 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 DMP1Q13316 513 aaPredicted RBP17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 MAN2A1Q16706 1144 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 VWA3BQ502W6 1294 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 TC2NQ8N9U0 490 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 TMEM174Q8WUU8 243 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 KCNN1Q92952 543 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 LENG1Q96BZ8 264 aaPredicted RBP17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 ARHGAP28Q9P2N2 729 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 GABRQQ9UN88 632 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 PPME1Q9Y570 386 aa17.25■□□□□ 0.35
NIPAL3-204ENST00000374399 A0A1W2PQC6 194 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 CCDC169A6NNP5 214 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 PPFIA4O75335 1185 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 GYPCP04921 128 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 MMP3P08254 477 aa17.24■□□□□ 0.35
NIPAL3-204ENST00000374399 DNM2P50570 870 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms