RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 STYXL1Q9Y6J8 313 aa13.79□□□□□ -0.2
PRPF4-202ENST00000374199 PSAPP07602 524 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 EPB41P11171 864 aaKnown RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 XRCC5P13010 732 aaKnown RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 CASQ1P31415 396 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 ABCD1P33897 745 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 ACTR2P61160 394 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 FSTL1Q12841 308 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 CCDC60Q8IWA6 550 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 XPNPEP1Q9NQW7 623 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 FAM207AQ9NSI2 230 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 CTDP1Q9Y5B0 961 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 EFCAB8A8MWE9 144 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 PIGRP01833 764 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 PLEKP08567 350 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 MYCLP12524 364 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 H2AFXP16104 143 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 GNG11P61952 73 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 CLDN10P78369 228 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 STXBP2Q15833 593 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 GNPTABQ3T906 1256 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 TRAPPC11Q7Z392 1133 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 GTF3C2Q8WUA4 911 aaPredicted RBP13.78□□□□□ -0.2
PRPF4-202ENST00000374199 KIFAP3Q92845 792 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 ATP6V0A1Q93050 837 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 TSGA10Q9BZW7 698 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 IKZF4Q9H2S9 585 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 FAM53CQ9NYF3 392 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 ARHGAP28Q9P2N2 729 aa13.78□□□□□ -0.2
PRPF4-202ENST00000374199 DDX39AO00148 427 aaKnown RBP13.77□□□□□ -0.2
PRPF4-202ENST00000374199 SMYD5Q6GMV2 418 aa13.77□□□□□ -0.2
PRPF4-202ENST00000374199 ACCSQ96QU6 501 aa13.77□□□□□ -0.2
PRPF4-202ENST00000374199 PCYT2Q99447 389 aa13.77□□□□□ -0.2
PRPF4-202ENST00000374199 LACRTQ9GZZ8 138 aa13.77□□□□□ -0.2
PRPF4-202ENST00000374199 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 TESPA1A2RU30 521 aaPredicted RBP13.77□□□□□ -0.21
PRPF4-202ENST00000374199 KIF5CO60282 957 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 LGR5O75473 907 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 FARP2O94887 1054 aaPredicted RBP13.77□□□□□ -0.21
PRPF4-202ENST00000374199 UCHL3P15374 230 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 RFX1P22670 979 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 KIF11P52732 1056 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 LSM14BQ9BX40 385 aaKnown RBP13.77□□□□□ -0.21
PRPF4-202ENST00000374199 DHX33Q9H6R0 707 aaKnown RBP13.77□□□□□ -0.21
PRPF4-202ENST00000374199 TRPM7Q96QT4 1865 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 ADSSP30520 456 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 TAS1R3Q7RTX0 852 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 FAM186BQ8IYM0 893 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 BSNDQ8WZ55 320 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 MAP7D2Q96T17 732 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 ELP3Q9H9T3 547 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 TXNRD2Q9NNW7 524 aa13.77□□□□□ -0.21
PRPF4-202ENST00000374199 AJAP1Q9UKB5 411 aaPredicted RBP13.77□□□□□ -0.21
PRPF4-202ENST00000374199 DGAT1O75907 488 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 FMO5P49326 533 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 CNTN2Q02246 1040 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 SLC39A4Q6P5W5 647 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 FASTKD5Q7L8L6 764 aaKnown RBP13.76□□□□□ -0.21
PRPF4-202ENST00000374199 EHBP1Q8NDI1 1231 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF526Q8TF50 670 aaPredicted RBP13.76□□□□□ -0.21
PRPF4-202ENST00000374199 LZTFL1Q9NQ48 299 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 GFPT2O94808 682 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 PRLRP16471 622 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 BFSP1Q12934 665 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 EPC2Q52LR7 807 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 OTUD6AQ7L8S5 288 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 SLC30A5Q8TAD4 765 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 TSC1Q92574 1164 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 CYP26B1Q9NR63 512 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 CDC23Q9UJX2 597 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 TBX20Q9UMR3 447 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 PCDHA13Q9Y5I0 950 aa13.76□□□□□ -0.21
PRPF4-202ENST00000374199 BZW2Q9Y6E2 419 aaKnown RBP13.76□□□□□ -0.21
PRPF4-202ENST00000374199 GSTTP1A0A1W2PQM5 241 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
PRPF4-202ENST00000374199 ARL2P36404 184 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 EIF4A3P38919 411 aaKnown RBP13.75□□□□□ -0.21
PRPF4-202ENST00000374199 NPTX2P47972 431 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 XKR3Q5GH77 459 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 MIS18BP1Q6P0N0 1132 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 RRAGAQ7L523 313 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 HAUS6Q7Z4H7 955 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 SLC35F6Q8N357 371 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 MCPH1Q8NEM0 835 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 MS4A4AQ96JQ5 239 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 R3HDMLQ9H3Y0 253 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 MMRN2Q9H8L6 949 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 COQ4Q9Y3A0 265 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 ADGRA3Q8IWK6 1321 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 TMEM150BA6NC51 233 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 SLC9A1P19634 815 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 SLC18A3Q16572 532 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 EXOC3L4Q17RC7 722 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 SFMBT2Q5VUG0 894 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 KSR1Q8IVT5 923 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
PRPF4-202ENST00000374199 MFSD14AQ96MC6 490 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms