RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ATP5HO75947 161 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 GSTT1P30711 240 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 KLHL30Q0D2K2 578 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 AUHQ13825 339 aaKnown RBP13.95□□□□□ -0.18
PRPF4-201ENST00000374198 PEX26Q7Z412 305 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 CATIPQ7Z7H3 387 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 SYCP3Q8IZU3 236 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 ERP44Q9BS26 406 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 NACAP1Q9BZK3 213 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 FAM192AQ9GZU8 254 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 SPON1Q9HCB6 807 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 DBR1Q9UK59 544 aaKnown RBP13.95□□□□□ -0.18
PRPF4-201ENST00000374198 H0Y3Z8 333 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 PLCG1P19174 1290 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 PLTPP55058 493 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 ENOX2Q16206 610 aaKnown RBP13.95□□□□□ -0.18
PRPF4-201ENST00000374198 WASHC2DQ5SRD0 308 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 C10orf76Q5T2E6 689 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 ANKRD23Q86SG2 305 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 EXOC3L1Q86VI1 746 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 SH3TC2Q8TF17 1288 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 TMEM237Q96Q45 408 aa13.95□□□□□ -0.18
PRPF4-201ENST00000374198 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 PENKP01210 267 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 RAPGEF1Q13905 1077 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 METTL24Q5JXM2 366 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TMTC3Q6ZXV5 915 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TPCN2Q8NHX9 752 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 PTPRN2Q92932 1015 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 CCDC85AQ96PX6 553 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TIPINQ9BVW5 301 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 PPP1R12CQ9BZL4 782 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 SEMA4AQ9H3S1 761 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 NMRK1Q9NWW6 199 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 SUCLA2Q9P2R7 463 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 DAAM1Q9Y4D1 1078 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 RPTORQ8N122 1335 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TJP1Q07157 1748 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 CNTNAP5Q8WYK1 1306 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 SIGLEC16A6NMB1 481 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 CACNA2D1P54289 1103 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 DR1Q01658 176 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ITPK1Q13572 414 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ACVR2BQ13705 512 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ACBD5Q5T8D3 534 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ZDHHC24Q6UX98 284 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 MAGEB6Q8N7X4 407 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 LINC00116Q8NCU8 138 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 UHMK1Q8TAS1 419 aaKnown RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 CKAP2Q8WWK9 683 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 AZIN2Q96A70 460 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 NAP1L3Q99457 506 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 LSM14BQ9BX40 385 aaKnown RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 AIPL1Q9NZN9 384 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 STXBP5LQ9Y2K9 1186 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 LGR5O75473 907 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 SCG2P13521 617 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 RASA1P20936 1047 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 PTENP60484 403 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 RCN2Q14257 317 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 SOGA3Q5TF21 947 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 MFSD5Q6N075 450 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 CGB2Q6NT52 195 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 BICDL1Q6ZP65 573 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 LRRC55Q6ZSA7 311 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 TTC8Q8TAM2 541 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 FBXO25Q8TCJ0 367 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 ESR2Q92731 530 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 PPP1R1BQ9UD71 204 aaPredicted RBP13.94□□□□□ -0.18
PRPF4-201ENST00000374198 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
PRPF4-201ENST00000374198 MROH7Q68CQ1 1323 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 FGGP02679 453 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 KCNA3P22001 575 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 TROAPQ12815 778 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 MKRN3Q13064 507 aaKnown RBP13.93□□□□□ -0.18
PRPF4-201ENST00000374198 ASIC2Q16515 512 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 SLFN11Q7Z7L1 901 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 LCA5Q86VQ0 697 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 MIPOL1Q8TD10 442 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 INPP5DQ92835 1189 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 GBP5Q96PP8 586 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 VCX3BQ9H321 246 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 DCLRE1BQ9H816 532 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 VCX3AQ9NNX9 186 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 GALNT8Q9NY28 637 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 FLT1P17948 1338 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 SKIP12755 728 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 VHLP40337 213 aa13.93□□□□□ -0.18
PRPF4-201ENST00000374198 SERPINB4P48594 390 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms