RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 EDEM3Q9BZQ6 932 aa17.24■□□□□ 0.35
HDAC8-209ENST00000373589 MMRN2Q9H8L6 949 aa17.24■□□□□ 0.35
HDAC8-209ENST00000373589 NMRK2Q9NPI5 230 aa17.24■□□□□ 0.35
HDAC8-209ENST00000373589 XPNPEP1Q9NQW7 623 aa17.24■□□□□ 0.35
HDAC8-209ENST00000373589 FAM207AQ9NSI2 230 aaPredicted RBP17.24■□□□□ 0.35
HDAC8-209ENST00000373589 SEPT9Q9UHD8 586 aaPredicted RBP17.24■□□□□ 0.35
HDAC8-209ENST00000373589 GOLGA6L9A6NEM1 432 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 GGPS1O95749 300 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 ITGBL1O95965 494 aaPredicted RBP17.23■□□□□ 0.35
HDAC8-209ENST00000373589 TUBB4AP04350 444 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
HDAC8-209ENST00000373589 PSMC2P35998 433 aaKnown RBP17.23■□□□□ 0.35
HDAC8-209ENST00000373589 RTP1P59025 263 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 LY6KQ17RY6 165 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 MCPH1Q8NEM0 835 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 ZNF397Q8NF99 534 aaPredicted RBP17.23■□□□□ 0.35
HDAC8-209ENST00000373589 AFAP1L1Q8TED9 768 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 SPIRE2Q8WWL2 714 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 CHP1Q99653 195 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 PTPN18Q99952 460 aa17.23■□□□□ 0.35
HDAC8-209ENST00000373589 CGNQ9P2M7 1197 aaKnown RBP17.23■□□□□ 0.35
HDAC8-209ENST00000373589 OATP04181 439 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 CCDC175P0C221 793 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
HDAC8-209ENST00000373589 NPTX2P47972 431 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 CDK17Q00537 523 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 TSR1Q2NL82 804 aaKnown RBP17.22■□□□□ 0.35
HDAC8-209ENST00000373589 ZNF792Q3KQV3 632 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 CCDC62Q6P9F0 684 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 C12orf56Q8IXR9 622 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 SYCP3Q8IZU3 236 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 ABRAQ8N0Z2 381 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 TMEM161BQ8NDZ6 487 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 SEPT1Q8WYJ6 367 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 SLC35C1Q96A29 364 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 NIFKQ9BYG3 293 aaKnown RBP17.22■□□□□ 0.35
HDAC8-209ENST00000373589 ARID2Q68CP9 1835 aa17.22■□□□□ 0.35
HDAC8-209ENST00000373589 ASB14A6NK59 587 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 SLC16A4O15374 487 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 NOL4O94818 638 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 AFPP02771 609 aaKnown RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 DMP1Q13316 513 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 CELF3Q5SZQ8 465 aaKnown RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 FAM186BQ8IYM0 893 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 NEK11Q8NG66 645 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 BAP1Q92560 729 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 HVCN1Q96D96 273 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 CEP89Q96ST8 783 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 ATP6V0A4Q9HBG4 840 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 PLAGL2Q9UPG8 496 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 PAXBP1Q9Y5B6 917 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 ZNFX1Q9P2E3 1918 aaKnown RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 STRNO43815 780 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 SMTNP53814 917 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 SOX10P56693 466 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 TRIM65Q6PJ69 517 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 FBXO16Q8IX29 292 aaPredicted RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 PARK7Q99497 189 aaKnown RBP17.21■□□□□ 0.35
HDAC8-209ENST00000373589 MLXIPQ9HAP2 919 aa17.21■□□□□ 0.35
HDAC8-209ENST00000373589 ADORA2AP29274 412 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 TCF7P36402 384 aaPredicted RBP17.2■□□□□ 0.34
HDAC8-209ENST00000373589 CYP2J2P51589 502 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 STAT5BP51692 787 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 ETF1P62495 437 aaKnown RBP17.2■□□□□ 0.34
HDAC8-209ENST00000373589 MTERF2Q49AM1 385 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 FAM160B1Q5W0V3 765 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 DPY19L2P1Q6NXN4 242 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 GPR20Q99678 358 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 CRACR2AQ9BSW2 395 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 DHX33Q9H6R0 707 aaKnown RBP17.2■□□□□ 0.34
HDAC8-209ENST00000373589 ZNHIT6Q9NWK9 470 aaKnown RBP17.2■□□□□ 0.34
HDAC8-209ENST00000373589 CEP72Q9P209 647 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 TBX20Q9UMR3 447 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 FRMD4BQ9Y2L6 1034 aa17.2■□□□□ 0.34
HDAC8-209ENST00000373589 MYH9P35579 1960 aaKnown RBP17.2■□□□□ 0.34
HDAC8-209ENST00000373589 CCDC169A6NNP5 214 aa17.19■□□□□ 0.34
HDAC8-209ENST00000373589 EMC2Q15006 297 aa17.19■□□□□ 0.34
HDAC8-209ENST00000373589 TARBP2Q15633 366 aaKnown RBP17.19■□□□□ 0.34
HDAC8-209ENST00000373589 DCAF17Q5H9S7 520 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-209ENST00000373589 CHADLQ6NUI6 762 aa17.19■□□□□ 0.34
HDAC8-209ENST00000373589 ARMCX2Q7L311 632 aa17.19■□□□□ 0.34
HDAC8-209ENST00000373589 MAP4K3Q8IVH8 894 aa17.19■□□□□ 0.34
HDAC8-209ENST00000373589 LSM14BQ9BX40 385 aaKnown RBP17.19■□□□□ 0.34
HDAC8-209ENST00000373589 KMT5AQ9NQR1 393 aa17.19■□□□□ 0.34
HDAC8-209ENST00000373589 EPN1Q9Y6I3 576 aaPredicted RBP17.19■□□□□ 0.34
HDAC8-209ENST00000373589 GTPBP10A4D1E9 387 aaKnown RBP17.18■□□□□ 0.34
HDAC8-209ENST00000373589 TISP43B9A030 160 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 LGR5O75473 907 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 NDUFA10O95299 355 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 HUNKP57058 714 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 FAM110CQ1W6H9 321 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 HSDL1Q3SXM5 330 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 ZNF467Q7Z7K2 595 aaPredicted RBP17.18■□□□□ 0.34
HDAC8-209ENST00000373589 ACRBPQ8NEB7 543 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 KIF18AQ8NI77 898 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 KCNN1Q92952 543 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 KIFC3Q9BVG8 833 aa17.18■□□□□ 0.34
HDAC8-209ENST00000373589 GANQ9H2C0 597 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms