RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 DHX8Q14562 1220 aaKnown RBP20.6■□□□□ 0.89
CDX4-201ENST00000373514 KIZQ2M2Z5 673 aa20.6■□□□□ 0.89
CDX4-201ENST00000373514 KLHL40Q2TBA0 621 aa20.6■□□□□ 0.89
CDX4-201ENST00000373514 FAM26DQ5JW98 314 aa20.6■□□□□ 0.89
CDX4-201ENST00000373514 KSR1Q8IVT5 923 aa20.6■□□□□ 0.89
CDX4-201ENST00000373514 TRPV2Q9Y5S1 764 aa20.6■□□□□ 0.89
CDX4-201ENST00000373514 SLC26A4O43511 780 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 MBD3O95983 291 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 TMOD1P28289 359 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 MCM6Q14566 821 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 TCTN1Q2MV58 587 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 NAALADL2Q58DX5 795 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 RESP18Q5W5W9 173 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 RHPN2Q8IUC4 686 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 TMEM40Q8WWA1 233 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 RAD54LQ92698 747 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 OSMRQ99650 979 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 GDF15Q99988 308 aa20.59■□□□□ 0.89
CDX4-201ENST00000373514 SUCLA2Q9P2R7 463 aaPredicted RBP20.59■□□□□ 0.89
CDX4-201ENST00000373514 GPR32O75388 356 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 PLA2G4BP0C869 781 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 GHRP10912 638 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 GPC3P51654 580 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 SLC12A3P55017 1021 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 C16orf59Q7L2K0 433 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 ASAP3Q8TDY4 903 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 CELF4Q9BZC1 486 aaKnown RBP20.58■□□□□ 0.89
CDX4-201ENST00000373514 POLR3FQ9H1D9 316 aaPredicted RBP20.58■□□□□ 0.89
CDX4-201ENST00000373514 CCDC39Q9UFE4 941 aa20.58■□□□□ 0.89
CDX4-201ENST00000373514 M0QZ92 97 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 NLRP11P59045 1033 aaKnown RBP20.58■□□□□ 0.88
CDX4-201ENST00000373514 RAD51AP2Q09MP3 1159 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 LPIN1Q14693 890 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 IER5Q5VY09 327 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 RINT1Q6NUQ1 792 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 CHRDL2Q6WN34 429 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 NME8Q8N427 588 aa20.58■□□□□ 0.88
CDX4-201ENST00000373514 JPH2Q9BR39 696 aaPredicted RBP20.58■□□□□ 0.88
CDX4-201ENST00000373514 NPHP3-ACAD11A0A0J9YXS1 232 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 DNM2P50570 870 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 CACNB1Q02641 598 aaPredicted RBP20.57■□□□□ 0.88
CDX4-201ENST00000373514 PPIGQ13427 754 aaKnown RBP eCLIP20.57■□□□□ 0.88
CDX4-201ENST00000373514 FBXO47Q5MNV8 452 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 FAM102BQ5T8I3 360 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 RRAGBQ5VZM2 374 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 SYT2Q8N9I0 419 aaPredicted RBP20.57■□□□□ 0.88
CDX4-201ENST00000373514 PRPF31Q8WWY3 499 aaKnown RBP20.57■□□□□ 0.88
CDX4-201ENST00000373514 PSPC1Q8WXF1 523 aaKnown RBP20.57■□□□□ 0.88
CDX4-201ENST00000373514 BSNDQ8WZ55 320 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 LARP4BQ92615 738 aaKnown RBP20.57■□□□□ 0.88
CDX4-201ENST00000373514 NLRP4Q96MN2 994 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 ADAMTS10Q9H324 1103 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 IL23AQ9NPF7 189 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 COL4A3BPQ9Y5P4 624 aa20.57■□□□□ 0.88
CDX4-201ENST00000373514 A0A1B0GVL5 298 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 GOLGA6L4A6NEF3 574 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 RPLP2P05387 115 aaKnown RBP20.56■□□□□ 0.88
CDX4-201ENST00000373514 PFKFB1P16118 471 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 CYP11B2P19099 503 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 STAT6P42226 847 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 E2F4Q16254 413 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 C9orf50Q5SZB4 431 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 ADALQ6DHV7 355 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 GPBP1Q86WP2 473 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 TCP11Q8WWU5 503 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 NLRP7Q8WX94 980 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 DHX58Q96C10 678 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 SCLT1Q96NL6 688 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDX4-201ENST00000373514 GOLPH3LQ9H4A5 285 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 AGO3Q9H9G7 860 aaKnown RBP20.56■□□□□ 0.88
CDX4-201ENST00000373514 STK17AQ9UEE5 414 aa20.56■□□□□ 0.88
CDX4-201ENST00000373514 A0A087WZ62 844 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 GAS2O43903 313 aaKnown RBP20.55■□□□□ 0.88
CDX4-201ENST00000373514 CSDE1O75534 798 aaKnown RBP20.55■□□□□ 0.88
CDX4-201ENST00000373514 CXCL10P02778 98 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 GLRA2P23416 452 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 RFC2P35250 354 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 ARL2P36404 184 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 LAMTOR4Q0VGL1 99 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 CAPSQ13938 189 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 C1orf186Q6ZWK4 172 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 EXOC8Q8IYI6 725 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 MCPH1Q8NEM0 835 aa20.55■□□□□ 0.88
CDX4-201ENST00000373514 FDXACB1Q9BRP7 624 aaPredicted RBP20.55■□□□□ 0.88
CDX4-201ENST00000373514 UBE2OQ9C0C9 1292 aaKnown RBP20.55■□□□□ 0.88
CDX4-201ENST00000373514 HIP1RO75146 1068 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 FGFR4P22455 802 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 MAPK7Q13164 816 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 ARSHQ5FYA8 562 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 CCDC73Q6ZRK6 1079 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 DAW1Q8N136 415 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 KCTD17Q8N5Z5 321 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 FAM13BQ9NYF5 915 aa20.54■□□□□ 0.88
CDX4-201ENST00000373514 SRGAP2CP0DJJ0 459 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 CD52P31358 61 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 CRYBB1P53674 252 aaPredicted RBP20.53■□□□□ 0.88
CDX4-201ENST00000373514 TMEM240Q5SV17 173 aa20.53■□□□□ 0.88
CDX4-201ENST00000373514 PRPF38BQ5VTL8 546 aaKnown RBP20.53■□□□□ 0.88
CDX4-201ENST00000373514 TSHZ1Q6ZSZ6 1077 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms