RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 LRRIQ3A6PVS8 624 aaPredicted RBP14□□□□□ -0.17
GPC3-201ENST00000370818 LIG3P49916 1009 aa14□□□□□ -0.17
GPC3-201ENST00000370818 COG2Q14746 738 aa14□□□□□ -0.17
GPC3-201ENST00000370818 TMEM132BQ14DG7 1078 aa14□□□□□ -0.17
GPC3-201ENST00000370818 NFIL3Q16649 462 aa14□□□□□ -0.17
GPC3-201ENST00000370818 SKIDA1Q1XH10 827 aa14□□□□□ -0.17
GPC3-201ENST00000370818 ARHGEF16Q5VV41 709 aa14□□□□□ -0.17
GPC3-201ENST00000370818 CEP112Q8N8E3 955 aa14□□□□□ -0.17
GPC3-201ENST00000370818 SYN2Q92777 582 aaPredicted RBP14□□□□□ -0.17
GPC3-201ENST00000370818 SAMM50Q9Y512 469 aa14□□□□□ -0.17
GPC3-201ENST00000370818 PPP2R3BQ9Y5P8 575 aa14□□□□□ -0.17
GPC3-201ENST00000370818 LYPLA2O95372 231 aa14□□□□□ -0.17
GPC3-201ENST00000370818 CCNE2O96020 404 aa14□□□□□ -0.17
GPC3-201ENST00000370818 XRCC5P13010 732 aaKnown RBP14□□□□□ -0.17
GPC3-201ENST00000370818 QARSP47897 775 aaKnown RBP14□□□□□ -0.17
GPC3-201ENST00000370818 RARRES1P49788 294 aa14□□□□□ -0.17
GPC3-201ENST00000370818 OAZ1P54368 228 aa14□□□□□ -0.17
GPC3-201ENST00000370818 SATB1Q01826 763 aa14□□□□□ -0.17
GPC3-201ENST00000370818 SPA17Q15506 151 aa14□□□□□ -0.17
GPC3-201ENST00000370818 NOL9Q5SY16 702 aaKnown RBP14□□□□□ -0.17
GPC3-201ENST00000370818 CATSPERGQ6ZRH7 1159 aa14□□□□□ -0.17
GPC3-201ENST00000370818 SLC35C1Q96A29 364 aa14□□□□□ -0.17
GPC3-201ENST00000370818 AFG3L2Q9Y4W6 797 aa14□□□□□ -0.17
GPC3-201ENST00000370818 TESPA1A2RU30 521 aaPredicted RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 PPP1R37O75864 691 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 SYF2O95926 243 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 AFPP02771 609 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 EPB41P11171 864 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 TUBB2AQ13885 445 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 UGCGQ16739 394 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 DLK2Q6UY11 383 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 VSIG10LQ86VR7 867 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.99□□□□□ -0.171e-323■■■□□ 19.2
GPC3-201ENST00000370818 TUBB2BQ9BVA1 445 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 IFIH1Q9BYX4 1025 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 NUCKS1Q9H1E3 243 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 METTL14Q9HCE5 456 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 DBR1Q9UK59 544 aaKnown RBP13.99□□□□□ -0.17
GPC3-201ENST00000370818 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 PCDHA13Q9Y5I0 950 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 PHIPQ8WWQ0 1821 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 UBE4BO95155 1302 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 SSU72P8A0A1W2PR75 194 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 RNF40O75150 1001 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 ACTN1P12814 892 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 SLC9A1P19634 815 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 PRKG1Q13976 671 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 FBXW10Q5XX13 1052 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 MAEAQ7L5Y9 396 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 AFAP1L1Q8TED9 768 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
GPC3-201ENST00000370818 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 ENC1O14682 589 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 ATP2A1O14983 1001 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 AKR1B10O60218 316 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 USP2O75604 605 aaPredicted RBP13.98□□□□□ -0.17
GPC3-201ENST00000370818 NR3C2P08235 984 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 RHOXF2BP0C7M4 288 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 YWHABP31946 246 aaKnown RBP13.98□□□□□ -0.17
GPC3-201ENST00000370818 TUBB4BP68371 445 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 GFPT1Q06210 699 aaPredicted RBP13.98□□□□□ -0.17
GPC3-201ENST00000370818 KIF5AQ12840 1032 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 DCAF17Q5H9S7 520 aaPredicted RBP13.98□□□□□ -0.17
GPC3-201ENST00000370818 SFMBT2Q5VUG0 894 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 RHOXF2Q9BQY4 288 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 SH2D3AQ9BRG2 576 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 AGPAT3Q9NRZ7 376 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 DMAC2Q9NW81 257 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 MACROD2A1Z1Q3 448 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 RGS20O76081 388 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 PON1P27169 355 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 SUPT20HL1Q3ZLR7 823 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 XRRA1Q6P2D8 792 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 TRAPPC11Q7Z392 1133 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 EHBP1Q8NDI1 1231 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 INPP4AQ96PE3 977 aaPredicted RBP13.98□□□□□ -0.17
GPC3-201ENST00000370818 GBP3Q9H0R5 595 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 HDAC6Q9UBN7 1215 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 MYO6Q9UM54 1294 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
GPC3-201ENST00000370818 SPDYE16A6NNV3 312 aaPredicted RBP13.97□□□□□ -0.17
GPC3-201ENST00000370818 RBAK-RBAKDNI3L0D1 243 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 ATP1A1P05023 1023 aaKnown RBP13.97□□□□□ -0.17
GPC3-201ENST00000370818 SERPING1P05155 500 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 USP8P40818 1118 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 EXOC3L4Q17RC7 722 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 SLC9C1Q4G0N8 1177 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 KLHDC7AQ5VTJ3 777 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 TCERG1LQ5VWI1 586 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.97□□□□□ -0.17
GPC3-201ENST00000370818 STXBP4Q6ZWJ1 553 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 C4orf19Q8IY42 314 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 TEX13BQ9BXU2 312 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 TSGA10Q9BZW7 698 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 AIPL1Q9NZN9 384 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 FAM169AQ9Y6X4 670 aa13.97□□□□□ -0.17
GPC3-201ENST00000370818 COL11A1P12107 1806 aaPredicted RBP13.97□□□□□ -0.17
GPC3-201ENST00000370818 WDR64B1ANS9 1081 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms