RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PIGWQ7Z7B1 504 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ANKRD42Q8N9B4 389 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 MAGEC3Q8TD91 643 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 DYDC1Q8WWB3 177 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ALG3Q92685 438 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 HES6Q96HZ4 224 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 FAM167BQ9BTA0 163 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ECT2Q9H8V3 914 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 MED24O75448 989 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 MMP13P45452 471 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 SIK1P57059 783 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 KLRC3Q07444 240 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 ZDHHC24Q6UX98 284 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 SFR1Q86XK3 245 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 JAMLQ86YT9 394 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 TXLNGYQ9BZA5 131 aa13.32□□□□□ -0.28
PHGDH-201ENST00000369407 PABPC3Q9H361 631 aaKnown RBP13.32□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L15C9J2P7 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L13C9JLJ4 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L11C9JVI0 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L18D6R9N7 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L22D6RA61 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L17D6RBQ6 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L19D6RCP7 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L20D6RJB6 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 PPP1R11O60927 126 aaPredicted RBP13.31□□□□□ -0.28
PHGDH-201ENST00000369407 SLURP2P0DP57 97 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 HOXD13P35453 343 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 SSR1P43307 286 aaKnown RBP13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L24Q0WX57 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 DUPD1Q68J44 220 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 USP17L6PQ6QN14 398 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 SLFN11Q7Z7L1 901 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 RPTORQ8N122 1335 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 GDAP1Q8TB36 358 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 LMBR1Q8WVP7 490 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 ZNF570Q96NI8 536 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 C15orf41Q9Y2V0 281 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 BTNL10A8MVZ5 291 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 ANKRD63C9JTQ0 380 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 DDX3YO15523 660 aaKnown RBP13.31□□□□□ -0.28
PHGDH-201ENST00000369407 EVI5O60447 810 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 KRT16P08779 473 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 RPL21P46778 160 aaKnown RBP13.31□□□□□ -0.28
PHGDH-201ENST00000369407 LONRF1Q17RB8 773 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 SLC30A10Q6XR72 485 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 MICAL1Q8TDZ2 1067 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 LRRC27Q9C0I9 530 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 RAB17Q9H0T7 212 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 SIX2Q9NPC8 291 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 CCDC88AQ3V6T2 1871 aa13.31□□□□□ -0.28
PHGDH-201ENST00000369407 TCP11X1B4DZS4 312 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 RARAP10276 462 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 KCNJ1P48048 391 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 NCALDP61601 193 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 EPHA7Q15375 998 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ARHGAP44Q17R89 818 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 NBPF20Q3BBV1 942 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 KIAA1755Q5JYT7 1200 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ERICH1Q86X53 443 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 CPNE8Q86YQ8 564 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 KRT35Q92764 455 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 POP1Q99575 1024 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 THAP2Q9H0W7 228 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 SPATS2LQ9NUQ6 558 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 KIAA0391O15091 583 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 EIF3BP55884 814 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 PTENP60484 403 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 CYP4A11Q02928 519 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 SEPT14Q6ZU15 432 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 BZW1Q7L1Q6 419 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 VPS36Q86VN1 386 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 SEC14L1Q92503 715 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ARHGEF10LQ9HCE6 1279 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ANKIB1Q9P2G1 1089 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ITGB4P16144 1822 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 TCRBV7S2A1N4TA0A589 114 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 CCDC169A6NNP5 214 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ASAP2O43150 1006 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 LRRN2O75325 713 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 NQO1P15559 274 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 BARGINQ6ZT62 677 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 SYCE1Q8N0S2 351 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 DDX23Q9BUQ8 820 aaKnown RBP13.3□□□□□ -0.28
PHGDH-201ENST00000369407 CTNNAL1Q9UBT7 734 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 COG5Q9UP83 839 aa13.3□□□□□ -0.28
PHGDH-201ENST00000369407 ACSL3O95573 720 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 BTDP43251 543 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 MARSP56192 900 aaKnown RBP13.29□□□□□ -0.28
PHGDH-201ENST00000369407 TNIP1Q15025 636 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 ZDHHC14Q8IZN3 488 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 SLC17A8Q8NDX2 589 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 P3H4Q92791 437 aa13.29□□□□□ -0.28
PHGDH-201ENST00000369407 KLHL29Q96CT2 875 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms