RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TSPYL2Q9H2G4 693 aaPredicted RBP20.64■□□□□ 0.89
CHTOP-202ENST00000368687 ADAMTS10Q9H324 1103 aa20.64■□□□□ 0.89
CHTOP-202ENST00000368687 ATP6V0A4Q9HBG4 840 aa20.64■□□□□ 0.89
CHTOP-202ENST00000368687 C1orf112Q9NSG2 853 aa20.64■□□□□ 0.89
CHTOP-202ENST00000368687 CHD7Q9P2D1 2997 aa20.63■□□□□ 0.89
CHTOP-202ENST00000368687 SLC26A4O43511 780 aa20.63■□□□□ 0.89
CHTOP-202ENST00000368687 CCT6AP40227 531 aaKnown RBP20.63■□□□□ 0.89
CHTOP-202ENST00000368687 RARRES1P49788 294 aa20.63■□□□□ 0.89
CHTOP-202ENST00000368687 RABGGTBP53611 331 aa20.63■□□□□ 0.89
CHTOP-202ENST00000368687 NFX1Q12986 1120 aaKnown RBP20.63■□□□□ 0.89
CHTOP-202ENST00000368687 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.63■□□□□ 0.89
CHTOP-202ENST00000368687 AK8Q96MA6 479 aa20.63■□□□□ 0.89
CHTOP-202ENST00000368687 ERVK-5Q9HDB9 667 aa20.63■□□□□ 0.89
CHTOP-202ENST00000368687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.62■□□□□ 0.89
CHTOP-202ENST00000368687 STAG3L1P0CL83 205 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 DARSP14868 501 aaKnown RBP20.62■□□□□ 0.89
CHTOP-202ENST00000368687 SFPQP23246 707 aaKnown RBP eCLIP20.62■□□□□ 0.89
CHTOP-202ENST00000368687 GRIN2CQ14957 1233 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 PCBP1Q15365 356 aaKnown RBP eCLIP20.62■□□□□ 0.89
CHTOP-202ENST00000368687 RHPN2Q8IUC4 686 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 MCPH1Q8NEM0 835 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 SNX29Q8TEQ0 813 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 TMEM40Q8WWA1 233 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 MYLIPQ8WY64 445 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 SH2D3AQ9BRG2 576 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 OSBPL7Q9BZF2 842 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 NKX2-4Q9H2Z4 354 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 ST3GAL5Q9UNP4 418 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 YBX2Q9Y2T7 364 aaKnown RBP20.62■□□□□ 0.89
CHTOP-202ENST00000368687 NOC2LQ9Y3T9 749 aaKnown RBP20.62■□□□□ 0.89
CHTOP-202ENST00000368687 COL4A3BPQ9Y5P4 624 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 PRUNE2Q8WUY3 3088 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 MYO9BQ13459 2157 aa20.62■□□□□ 0.89
CHTOP-202ENST00000368687 UNC80Q8N2C7 3258 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 DENND3A2RUS2 1198 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 ENPP3O14638 875 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 MED24O75448 989 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 CA3P07451 260 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 HTRA4P83105 476 aaPredicted RBP20.61■□□□□ 0.89
CHTOP-202ENST00000368687 TFDP1Q14186 410 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 FERMT3Q86UX7 667 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 PPP1R16BQ96T49 567 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 YME1L1Q96TA2 773 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 NT5C3AQ9H0P0 336 aa20.61■□□□□ 0.89
CHTOP-202ENST00000368687 ARHGEF35A5YM69 484 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 ZSCAN20P17040 1043 aaPredicted RBP20.6■□□□□ 0.89
CHTOP-202ENST00000368687 DRP2Q13474 957 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 POTEGQ6S5H5 508 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 FAM228AQ86W67 206 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 NPAS4Q8IUM7 802 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 PIGOQ8TEQ8 1089 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 CDHR5Q9HBB8 845 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 DACT1Q9NYF0 836 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 MTMR6Q9Y217 621 aa20.6■□□□□ 0.89
CHTOP-202ENST00000368687 POU5F1BQ06416 359 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 RESTQ13127 1097 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 SLC24A5Q71RS6 500 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 ZNF579Q8NAF0 562 aaKnown RBP20.59■□□□□ 0.89
CHTOP-202ENST00000368687 PRPF31Q8WWY3 499 aaKnown RBP20.59■□□□□ 0.89
CHTOP-202ENST00000368687 NLRP4Q96MN2 994 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 CHST12Q9NRB3 414 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 RGS18Q9NS28 235 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 DNM3Q9UQ16 869 aa20.59■□□□□ 0.89
CHTOP-202ENST00000368687 MORC2Q9Y6X9 1032 aaPredicted RBP20.59■□□□□ 0.89
CHTOP-202ENST00000368687 A0A087WZ62 844 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 VWA3AA6NCI4 1184 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 ZBTB39O15060 712 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 MYOGP15173 224 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 LONP1P36776 959 aaKnown RBP20.58■□□□□ 0.89
CHTOP-202ENST00000368687 PHKA2P46019 1235 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 SARSP49591 514 aaKnown RBP20.58■□□□□ 0.89
CHTOP-202ENST00000368687 LAMTOR4Q0VGL1 99 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 SF3A1Q15459 793 aaKnown RBP20.58■□□□□ 0.89
CHTOP-202ENST00000368687 SLC17A8Q8NDX2 589 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 SP7Q8TDD2 431 aaPredicted RBP20.58■□□□□ 0.89
CHTOP-202ENST00000368687 RSPH1Q8WYR4 309 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 TMEM143Q96AN5 459 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 SAMD11Q96NU1 681 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 FDXACB1Q9BRP7 624 aaPredicted RBP20.58■□□□□ 0.89
CHTOP-202ENST00000368687 TMX1Q9H3N1 280 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 DAXXQ9UER7 740 aaPredicted RBP20.58■□□□□ 0.89
CHTOP-202ENST00000368687 LRFN2Q9ULH4 789 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 KIAA1024Q9UPX6 916 aa20.58■□□□□ 0.89
CHTOP-202ENST00000368687 MYH15Q9Y2K3 1946 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 UPP2O95045 317 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 BECN1Q14457 450 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 HYIQ5T013 277 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 FAM117BQ6P1L5 589 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 CDK5RAP3Q96JB5 506 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 GAS2L1Q99501 681 aaPredicted RBP20.57■□□□□ 0.88
CHTOP-202ENST00000368687 ADAM2Q99965 735 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 NFKBIZQ9BYH8 718 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 ELAC1Q9H777 363 aaKnown RBP20.57■□□□□ 0.88
CHTOP-202ENST00000368687 XPNPEP1Q9NQW7 623 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 DDX19AQ9NUU7 478 aaKnown RBP20.57■□□□□ 0.88
CHTOP-202ENST00000368687 RWDD3Q9Y3V2 267 aa20.57■□□□□ 0.88
CHTOP-202ENST00000368687 USO1O60763 962 aaKnown RBP20.56■□□□□ 0.88
CHTOP-202ENST00000368687 SKIP12755 728 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms