RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 KAT5Q92993 513 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 DHX36Q9H2U1 1008 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 HAUS2Q9NVX0 235 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 CNOT8Q9UFF9 292 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 DBR1Q9UK59 544 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 TCP10L2B9ZVM9 353 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 CTNND1O60716 968 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 ACSL3O95573 720 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 HLA-DOAP06340 250 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 ECE1P42892 770 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 GCLMP48507 274 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 SATB1Q01826 763 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 CERKLQ49MI3 558 aaPredicted RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 ASPRV1Q53RT3 343 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 ZNF662Q6ZS27 426 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 SLC20A1Q8WUM9 679 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 ARHGEF26Q96DR7 871 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 ATP6V1G3Q96LB4 118 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 TACO1Q9BSH4 297 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 THAP2Q9H0W7 228 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 ERVK-5Q9HDB9 667 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 BAIAP2L1Q9UHR4 511 aa9.64□□□□□ -0.87
THBS3-201ENST00000368378 DDX60LQ5H9U9 1706 aaKnown RBP9.64□□□□□ -0.87
THBS3-201ENST00000368378 PGRMC1O00264 195 aaKnown RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 PIAS1O75925 651 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 FLOT1O75955 427 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 GUCY2CP25092 1073 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 ICA1Q05084 483 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 DRAP1Q14919 205 aaPredicted RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 SLC27A3Q5K4L6 730 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 MEI1Q5TIA1 1274 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 VPS36Q86VN1 386 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 TRIM59Q8IWR1 403 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 GDAP1Q8TB36 358 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 SLC35G2Q8TBE7 412 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 MYCBPAPQ8TBZ2 947 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 TCP11Q8WWU5 503 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 C18orf8Q96DM3 657 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 BORCS6Q96GS4 357 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 PWWP2AQ96N64 755 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 TAF1DQ9H5J8 278 aaPredicted RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 TDRD3Q9H7E2 651 aaKnown RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 CAND2O75155 1236 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 GH2P01242 217 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 CLTAP09496 248 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 TNFAIP3P21580 790 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 HNRNPH3P31942 346 aaKnown RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 NF2P35240 595 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 RDXP35241 583 aaKnown RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 STAT1P42224 750 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 ODR4Q5SWX8 454 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 LMBRD2Q68DH5 695 aaPredicted RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 LLGL2Q6P1M3 1020 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 PRUNE1Q86TP1 453 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 FAM186BQ8IYM0 893 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 MSL3Q8N5Y2 521 aaKnown RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 SLC30A5Q8TAD4 765 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 DYDC2Q96IM9 177 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 KIFC3Q9BVG8 833 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 KCNK9Q9NPC2 374 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 RIC8AQ9NPQ8 531 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 DNAJC12Q9UKB3 198 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 UTP11Q9Y3A2 253 aaKnown RBP9.63□□□□□ -0.87
THBS3-201ENST00000368378 RABGAP1Q9Y3P9 1069 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 MYH7BA7E2Y1 1941 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 RREB1Q92766 1687 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 MAST2Q6P0Q8 1798 aa9.63□□□□□ -0.87
THBS3-201ENST00000368378 ESYT2A0FGR8 921 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 ATP2B4P23634 1241 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 YY1P25490 414 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 MDH1P40925 334 aaKnown RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 ERFP50548 548 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 DGKZQ13574 1117 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 PDIA5Q14554 519 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 UAP1Q16222 522 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 KNOP1Q1ED39 458 aaKnown RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 ASTE1Q2TB18 679 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 CBWD6Q4V339 395 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 CBWD3Q5JTY5 395 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 CBWD5Q5RIA9 395 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 CDC42EP5Q6NZY7 148 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 GBP6Q6ZN66 633 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 SLF2Q8IX21 1173 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 PPM1KQ8N3J5 372 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 VEZTQ9HBM0 779 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 UBE2TQ9NPD8 197 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 STK38LQ9Y2H1 464 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 DNAH12Q6ZR08 3092 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 DDX3XO00571 662 aaKnown RBP eCLIP9.62□□□□□ -0.87
THBS3-201ENST00000368378 PPP1R12BO60237 982 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 SOX10P56693 466 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 DLG4P78352 724 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 GIT2Q14161 759 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 PTGISQ16647 500 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 TMEM119Q4V9L6 283 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 APBB1IPQ7Z5R6 666 aaPredicted RBP9.62□□□□□ -0.87
THBS3-201ENST00000368378 CCDC105Q8IYK2 499 aa9.62□□□□□ -0.87
THBS3-201ENST00000368378 KRT35Q92764 455 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms