RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
CLIP1-203ENST00000361654 IQANK1A0A1B0GTG1 560 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 ORC2Q13416 577 aaPredicted RBP11.71□□□□□ -0.53
CLIP1-203ENST00000361654 IMPG1Q17R60 797 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 TBC1D9BQ66K14 1250 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 CENPUQ71F23 418 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 ENOX1Q8TC92 643 aaKnown RBP11.71□□□□□ -0.53
CLIP1-203ENST00000361654 TSSK1BQ9BXA7 367 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 PUS7LQ9H0K6 701 aaKnown RBP11.71□□□□□ -0.53
CLIP1-203ENST00000361654 UBE4BO95155 1302 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 H7C1W4 665 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 ASMTLO95671 621 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 SERPING1P05155 500 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 CYP21A2P08686 494 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 ZNF235Q14590 738 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 SLMAPQ14BN4 828 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 ARHGAP15Q53QZ3 475 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 CYP4F22Q6NT55 531 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 FAM133AQ8N9E0 248 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 NUDT12Q9BQG2 462 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 KRT82Q9NSB4 513 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 CYP2D7A0A087X1C5 515 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 PRRG1O14668 218 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 GH1P01241 217 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 RWDD2BP57060 319 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 TCP11X2Q5H9J9 407 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 EXT2Q93063 718 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 CFAP36Q96G28 342 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 PIH1D3Q9NQM4 214 aaKnown RBP11.71□□□□□ -0.53
CLIP1-203ENST00000361654 RWDD2AQ9UIY3 292 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 STK38LQ9Y2H1 464 aa11.71□□□□□ -0.53
CLIP1-203ENST00000361654 F5H6K3 240 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 DYNC1LI2O43237 492 aaPredicted RBP11.71□□□□□ -0.54
CLIP1-203ENST00000361654 SUN1O94901 812 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 SLC25A27O95847 323 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 CDK17Q00537 523 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 GUCY2DQ02846 1103 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 KLRC3Q07444 240 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 SPATS2Q86XZ4 545 aaKnown RBP11.71□□□□□ -0.54
CLIP1-203ENST00000361654 LPAR1Q92633 364 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 DESI2Q9BSY9 194 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 SEL1LQ9UBV2 794 aa11.71□□□□□ -0.54
CLIP1-203ENST00000361654 PIN4Q9Y237 131 aaKnown RBP11.71□□□□□ -0.54
CLIP1-203ENST00000361654 SPECC1L-ADORA2AF8WAN1 911 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CREB3O43889 395 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TOM1L1O75674 476 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CYP2B6P20813 491 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 STKLD1Q8NE28 680 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 FAF2Q96CS3 445 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TEX13BQ9BXU2 312 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TRPC7Q9HCX4 862 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CYP26B1Q9NR63 512 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 KDM1AO60341 852 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 GLB1LQ6UWU2 654 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 KIF12Q96FN5 646 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 SPATA17Q96L03 361 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CRAMP1Q96RY5 1269 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 POLR3FQ9H1D9 316 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-203ENST00000361654 ADGRL3Q9HAR2 1447 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 SLC9A2Q9UBY0 812 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 MOCS2O96007 188 aaPredicted RBP11.7□□□□□ -0.54
CLIP1-203ENST00000361654 STAG3L1P0CL83 205 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TMEM47Q9BQJ4 181 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 COG4Q9H9E3 785 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CCL15-CCL14A0A0B4J2E2 113 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 PRAMEF22A3QJZ6 481 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 KRT37O76014 449 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 UPP2O95045 317 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CELF2O95319 508 aaKnown RBP11.7□□□□□ -0.54
CLIP1-203ENST00000361654 ART3Q13508 389 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CCL15Q16663 113 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TTC8Q8TAM2 541 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 PIGOQ8TEQ8 1089 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 PYROXD1Q8WU10 500 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 OSBP2Q969R2 916 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CCDC138Q96M89 665 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TRIM15Q9C019 465 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 PCDHA10Q9Y5I2 948 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 M0QYV0 167 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 MAGEB2O15479 319 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 RPS12P25398 132 aaKnown RBP11.7□□□□□ -0.54
CLIP1-203ENST00000361654 STAT5BP51692 787 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 E2F5Q15329 346 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TMCO4Q5TGY1 634 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 EGFL8Q99944 293 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 FAM213AQ9BRX8 229 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 SMARCAD1Q9H4L7 1026 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 TLR7Q9NYK1 1049 aaKnown RBP11.7□□□□□ -0.54
CLIP1-203ENST00000361654 ADGRL2O95490 1459 aa11.7□□□□□ -0.54
CLIP1-203ENST00000361654 CDHR2Q9BYE9 1310 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 H3BRJ5 948 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 DNAJC6O75061 913 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 ANP32DO95626 131 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 CASP14P31944 242 aa11.69□□□□□ -0.54
CLIP1-203ENST00000361654 KIF23Q02241 960 aaPredicted RBP11.69□□□□□ -0.54
CLIP1-203ENST00000361654 PPARDQ03181 441 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms