RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RBM12Q9NTZ6 932 aaKnown RBP17.58■□□□□ 0.41
SCAF1-201ENST00000360565 NYAP2Q9P242 653 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 FEM1BQ9UK73 627 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 FHOD1Q9Y613 1164 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 RICTORQ6R327 1708 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 SART1O43290 800 aaKnown RBP17.58■□□□□ 0.41
SCAF1-201ENST00000360565 PLA2G4AP47712 749 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 PRPF38AQ8NAV1 312 aaKnown RBP17.58■□□□□ 0.41
SCAF1-201ENST00000360565 LRRN4CLQ8ND94 238 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 ADAM22Q9P0K1 906 aa17.58■□□□□ 0.41
SCAF1-201ENST00000360565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.58■□□□□ 0.41
SCAF1-201ENST00000360565 HIP1RO75146 1068 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 SRGAP2CP0DJJ0 459 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 MAP2K2P36507 400 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 GRB10Q13322 594 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 SULF1Q8IWU6 871 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 FAM213AQ9BRX8 229 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 MSTO1Q9BUK6 570 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 NBPF3Q9H094 633 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 MYBP10242 640 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 KLRC1P26715 233 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 JAK3P52333 1124 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 EPHA7Q15375 998 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 EDRF1Q3B7T1 1238 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 C6orf118Q5T5N4 469 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 BARGINQ6ZT62 677 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 ARMC9Q7Z3E5 817 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 HAUS6Q7Z4H7 955 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.58■□□□□ 0.4
SCAF1-201ENST00000360565 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.4
SCAF1-201ENST00000360565 DIS3Q9Y2L1 958 aaKnown RBP17.58■□□□□ 0.4
SCAF1-201ENST00000360565 MAD1L1Q9Y6D9 718 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.4
SCAF1-201ENST00000360565 KCTD2Q14681 263 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 SCARA5Q6ZMJ2 495 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 SH2D3CQ8N5H7 860 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 CALN1Q9BXU9 219 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 ZRANB2O95218 330 aaKnown RBP eCLIP17.57■□□□□ 0.4
SCAF1-201ENST00000360565 SPP2Q13103 211 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 RFX6Q8HWS3 928 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 PASD1Q8IV76 773 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 MCPH1Q8NEM0 835 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 TBC1D31Q96DN5 1066 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 GALCP54803 685 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 TRIM65Q6PJ69 517 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 GOLPH3Q9H4A6 298 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 FBXL5Q9UKA1 691 aa17.57■□□□□ 0.4
SCAF1-201ENST00000360565 A0A1W2PQJ5 194 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ADCY2Q08462 1091 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ARHGAP24Q8N264 748 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 FUT8Q9BYC5 575 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 VIPAS39Q9H9C1 493 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 PRR12Q9ULL5 1215 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 CCDC160A6NGH7 325 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 KRT76Q01546 638 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 FAM133BQ5BKY9 247 aaKnown RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 HHIPL2Q6UWX4 724 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 MAP7D3Q8IWC1 876 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 GDAP1Q8TB36 358 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ZNF564Q8TBZ8 553 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ATP2A3Q93084 1043 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ANKRD36BP1Q96IX9 119 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 DNAJC7Q99615 494 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 C11orf70Q9BRQ4 267 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 MIS12Q9H081 205 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 RNF146Q9NTX7 359 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 EXOC1LA0A1B0GW35 172 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 CHRNA5P30532 468 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 MAGEA9P43362 315 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 NT5DC1Q5TFE4 455 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ARHGEF18Q6ZSZ5 1173 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 RNPC3Q96LT9 517 aaKnown RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 EVI5O60447 810 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 TFDP1Q14186 410 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 ZC2HC1CQ53FD0 456 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 STRIP1Q5VSL9 837 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 HIBCHQ6NVY1 386 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 SDCCAG8Q86SQ7 713 aaPredicted RBP17.56■□□□□ 0.4
SCAF1-201ENST00000360565 TADA2BQ86TJ2 420 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 LMNTD2Q8IXW0 634 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 KLHL29Q96CT2 875 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 EHD2Q9NZN4 543 aa17.56■□□□□ 0.4
SCAF1-201ENST00000360565 INHBAP08476 426 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 RPA1P27694 616 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 PMS1P54277 932 aaKnown RBP17.55■□□□□ 0.4
SCAF1-201ENST00000360565 E2F5Q15329 346 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 MAP7D1Q3KQU3 841 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 NUGGCQ68CJ6 796 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 KRT39Q6A163 491 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 HAUS1Q96CS2 278 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 ELAC2Q9BQ52 826 aaKnown RBP17.55■□□□□ 0.4
SCAF1-201ENST00000360565 NUP85Q9BW27 656 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 SLITRK6Q9H5Y7 841 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 GABBR1Q9UBS5 961 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 TBX3O15119 743 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 MMEP08473 750 aa17.55■□□□□ 0.4
SCAF1-201ENST00000360565 MARK3P27448 753 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms