RNA–Protein interactions for RNA: ENST00000357867.8

FN1-205, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-205ENST00000357867 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.79□□□□□ -0.522e-7■■■■□ 25.7
FN1-205ENST00000357867 CCDC170Q8IYT3 715 aa11.79□□□□□ -0.52
FN1-205ENST00000357867 TSSK1BQ9BXA7 367 aa11.79□□□□□ -0.52
FN1-205ENST00000357867 THAP9Q9H5L6 903 aa11.79□□□□□ -0.52
FN1-205ENST00000357867 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
FN1-205ENST00000357867 DOLKQ9UPQ8 538 aa11.79□□□□□ -0.52
FN1-205ENST00000357867 RICTORQ6R327 1708 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 CHEK2O96017 543 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 GMPSP49915 693 aaPredicted RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 WHAMMP3Q1A5X7 153 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 SP110Q9HB58 689 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 TRPC7Q9HCX4 862 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 LMTK2Q8IWU2 1503 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 DDX5P17844 614 aaKnown RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 HAUS4Q9H6D7 363 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 BARHL2Q9NY43 387 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 DCDC2CA8MYV0 355 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 DYNLT1P63172 113 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 MAGED2Q9UNF1 606 aaPredicted RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 RRN3P2A6NIE6 340 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 NDUFAB1O14561 156 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 LINC00116Q8NCU8 138 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 MTMR6Q9Y217 621 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 SYNGAP1Q96PV0 1343 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 ZC3H4Q9UPT8 1303 aaKnown RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 UPP2O95045 317 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 HSPA6P17066 643 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 SFSWAPQ12872 951 aaKnown RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 LRRC41Q15345 812 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 BTBD8Q5XKL5 378 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 PCGF5Q86SE9 256 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 DDX53Q86TM3 631 aaKnown RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 ZC3H15Q8WU90 426 aaKnown RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 EEF2KMTQ96G04 330 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 LXNQ9BS40 222 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 VCX3AQ9NNX9 186 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 C3P01024 1663 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 FAM196BA6NMK8 535 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 STX1BP61266 288 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 TRIM28Q13263 835 aaKnown RBP11.78□□□□□ -0.52
FN1-205ENST00000357867 GRM4Q14833 912 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 C9orf131Q5VYM1 1079 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 HHIPL2Q6UWX4 724 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 AKAP12Q02952 1782 aa11.78□□□□□ -0.52
FN1-205ENST00000357867 PAPOLAP51003 745 aaKnown RBP11.77□□□□□ -0.52
FN1-205ENST00000357867 STAT5BP51692 787 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 ZNF445P59923 1031 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 GNASQ5JWF2 1037 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 ASIC4Q96FT7 647 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 SUCLA2Q9P2R7 463 aaPredicted RBP11.77□□□□□ -0.52
FN1-205ENST00000357867 CACNB1Q02641 598 aaPredicted RBP11.77□□□□□ -0.52
FN1-205ENST00000357867 SNX17Q15036 470 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 ARHGAP15Q53QZ3 475 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.52
FN1-205ENST00000357867 PBKQ96KB5 322 aa11.77□□□□□ -0.52
FN1-205ENST00000357867 ENTPD3O75355 529 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 GPC4O75487 556 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 SLFN14P0C7P3 912 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 STAG3L1P0CL83 205 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 YWHABP31946 246 aaKnown RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 CYP26B1Q9NR63 512 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 UBE4BO95155 1302 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 BRD1O95696 1058 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 MICALL1Q8N3F8 863 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 FAM71BQ8TC56 605 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 CARD6Q9BX69 1037 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 DEFB129Q9H1M3 183 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 GOLGA8IPA6NC78 632 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 GOLGA8JA6NMD2 632 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 PLEKHA8P1O95397 391 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 IFNA8P32881 189 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 BASP1P80723 227 aaKnown RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 LDHDQ86WU2 507 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 VPS39Q96JC1 886 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 ZFP91Q96JP5 570 aaPredicted RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 KLC2Q9H0B6 622 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 ERAP1Q9NZ08 941 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 KLHL8Q9P2G9 620 aaPredicted RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 MID2Q9UJV3 735 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 SART1O43290 800 aaKnown RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 GCLCP48506 637 aaPredicted RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 KRT39Q6A163 491 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 USP17L6PQ6QN14 398 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 TRIM72Q6ZMU5 477 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 UNC13DQ70J99 1090 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 TUFT1Q9NNX1 390 aa11.77□□□□□ -0.53
FN1-205ENST00000357867 RBAKQ9NYW8 714 aaPredicted RBP11.77□□□□□ -0.53
FN1-205ENST00000357867 CD4P01730 458 aa11.76□□□□□ -0.53
FN1-205ENST00000357867 VEGFAP15692 232 aaPredicted RBP11.76□□□□□ -0.53
FN1-205ENST00000357867 ALDH7A1P49419 539 aaKnown RBP11.76□□□□□ -0.53
FN1-205ENST00000357867 CAPN12Q6ZSI9 719 aa11.76□□□□□ -0.53
FN1-205ENST00000357867 CYFIP1Q7L576 1253 aa11.76□□□□□ -0.53
FN1-205ENST00000357867 ENOSF1Q7L5Y1 443 aa11.76□□□□□ -0.53
FN1-205ENST00000357867 ENAHQ8N8S7 591 aaPredicted RBP11.76□□□□□ -0.53
FN1-205ENST00000357867 TMEM35BQ8NCS4 154 aa11.76□□□□□ -0.53
FN1-205ENST00000357867 TTC4O95801 387 aa11.76□□□□□ -0.53
FN1-205ENST00000357867 CYP2B6P20813 491 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms