RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 CTNNA1P35221 906 aaKnown RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 SESN3P58005 492 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 EHHADHQ08426 723 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 QRICH1Q2TAL8 776 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 SLC9C1Q4G0N8 1177 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 DCAF17Q5H9S7 520 aaPredicted RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 EMBQ6PCB8 327 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 MYLK4Q86YV6 388 aaPredicted RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 ARL10Q8N8L6 244 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 NOX5Q96PH1 765 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 TLR10Q9BXR5 811 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
SMG6-202ENST00000354901 DPPA5A6NC42 116 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 ZBTB5O15062 677 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 KLRC1P26715 233 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 PSMC6P62333 389 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 ADAM9Q13443 819 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 PDIA5Q14554 519 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 KIAA0753Q2KHM9 967 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 KRT71Q3SY84 523 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 HAUS3Q68CZ6 603 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 DDX42Q86XP3 938 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMG6-202ENST00000354901 NLGN1Q8N2Q7 840 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 MAB21L3Q8N8X9 362 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 RAPGEF5Q92565 580 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 TRIM31Q9BZY9 425 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 DBNDD1Q9H9R9 158 aa10.17□□□□□ -0.78
SMG6-202ENST00000354901 DDX60LQ5H9U9 1706 aaKnown RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 A0A087X0T9 212 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 A6NNZ2 444 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 SFI1A8K8P3 1242 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 DCDC2CA8MYV0 355 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 GDF11O95390 407 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 FAM228BP0C875 321 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 TPP2P29144 1249 aaPredicted RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 SHMT1P34896 483 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 CASP5P51878 434 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 MAGOHP61326 146 aaKnown RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 KLHL30Q0D2K2 578 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 TUBB8Q3ZCM7 444 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 TMEM119Q4V9L6 283 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 CCDC65Q8IXS2 484 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 IFT20Q8IY31 132 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 ARFGAP2Q8N6H7 521 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 MAGOHBQ96A72 148 aaKnown RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 EMILIN3Q9NT22 766 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 PCDHGC5Q9Y5F6 944 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 GAKO14976 1311 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 SPDYE3A6NKU9 549 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 TPD52L2O43399 206 aaKnown RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 MED24O75448 989 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 RTN3O95197 1032 aaPredicted RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 NR2F2P24468 414 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 RXRBP28702 533 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 CDK17Q00537 523 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 PPP1R15BQ5SWA1 713 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 KLHDC7AQ5VTJ3 777 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 HGSNATQ68CP4 663 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 CCDC197Q8NCU1 140 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 MGARPQ8TDB4 240 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 C2CD2Q9Y426 696 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 NOL4O94818 638 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 TCP1P17987 556 aaKnown RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 HOXA13P31271 388 aaPredicted RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 GABPAQ06546 454 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 CWF19L1Q69YN2 538 aaKnown RBP10.16□□□□□ -0.78
SMG6-202ENST00000354901 CDC42EP5Q6NZY7 148 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 SPATA21Q7Z572 469 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 ARHGAP22Q7Z5H3 698 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 AKT1S1Q96B36 256 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 ANO3Q9BYT9 981 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 IKZF4Q9H2S9 585 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 RMI1Q9H9A7 625 aa10.16□□□□□ -0.78
SMG6-202ENST00000354901 PPEF1O14829 653 aaPredicted RBP10.15□□□□□ -0.78
SMG6-202ENST00000354901 CLIC2O15247 247 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 MGRN1O60291 552 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 SLC9A1P19634 815 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 HNRNPH3P31942 346 aaKnown RBP10.15□□□□□ -0.78
SMG6-202ENST00000354901 TUBP50607 506 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 DRP2Q13474 957 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 C6orf89Q6UWU4 347 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 SCFD1Q8WVM8 642 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 RHBDL2Q9NX52 303 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 RSPH10B2B2RC85 870 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 RSPH10BP0C881 870 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 EEF2P13639 858 aaKnown RBP10.15□□□□□ -0.78
SMG6-202ENST00000354901 CYP11B2P19099 503 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 SMARCA1P28370 1054 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 CDC37Q16543 378 aaPredicted RBP10.15□□□□□ -0.78
SMG6-202ENST00000354901 ANKRD20A2Q5SQ80 823 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 ANKRD20A1Q5TYW2 823 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 ANKRD20A3Q5VUR7 823 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 ZNF662Q6ZS27 426 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 ANKS4BQ8N8V4 417 aa10.15□□□□□ -0.78
SMG6-202ENST00000354901 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
SMG6-202ENST00000354901 FAM163AQ96GL9 167 aaPredicted RBP10.15□□□□□ -0.78
SMG6-202ENST00000354901 LRRC27Q9C0I9 530 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms