RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TMOD4Q9NZQ9 345 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 ESYT3A0FGR9 886 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 PDXKO00764 312 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 NR3C2P08235 984 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 SSTR3P32745 418 aaPredicted RBP15.16■□□□□ 0.02
TRIM4-201ENST00000349062 BACE1P56817 501 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 CNTN2Q02246 1040 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 FSTL1Q12841 308 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 NAA35Q5VZE5 725 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 ZNF720Q7Z2F6 126 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 GLYCTKQ8IVS8 523 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 KLHL7Q8IXQ5 586 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 NOX5Q96PH1 765 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 TUFT1Q9NNX1 390 aa15.16■□□□□ 0.02
TRIM4-201ENST00000349062 LARSQ9P2J5 1176 aaKnown RBP15.16■□□□□ 0.02
TRIM4-201ENST00000349062 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 EIF3JO75822 258 aaKnown RBP15.15■□□□□ 0.02
TRIM4-201ENST00000349062 SERPING1P05155 500 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 MMP14P50281 582 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 MCTP2Q6DN12 878 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 HDXQ7Z353 690 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 ZNF571Q7Z3V5 609 aaPredicted RBP15.15■□□□□ 0.02
TRIM4-201ENST00000349062 NCAPG2Q86XI2 1143 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 EHBP1Q8NDI1 1231 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 SLC35C1Q96A29 364 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 PDCD2LQ9BRP1 358 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 AGPAT3Q9NRZ7 376 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 P4HBP07237 508 aaKnown RBP15.15■□□□□ 0.02
TRIM4-201ENST00000349062 KRT13P13646 458 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 PTPRAP18433 802 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 PPP2R5CQ13362 524 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 WHAMMP3Q1A5X7 153 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 DCAF15Q66K64 600 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 HGSNATQ68CP4 663 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 IFT81Q8WYA0 676 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 OTUD5Q96G74 571 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 AGO4Q9HCK5 861 aaKnown RBP15.15■□□□□ 0.02
TRIM4-201ENST00000349062 ARFGEF1Q9Y6D6 1849 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 CCNE2O96020 404 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 MAP2K1Q02750 393 aaPredicted RBP15.15■□□□□ 0.02
TRIM4-201ENST00000349062 IQCEQ6IPM2 695 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 RBM46Q8TBY0 533 aaKnown RBP15.15■□□□□ 0.02
TRIM4-201ENST00000349062 KIAA1683Q9H0B3 1180 aa15.15■□□□□ 0.02
TRIM4-201ENST00000349062 MARK3P27448 753 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 SETQ01105 290 aaPredicted RBP15.14■□□□□ 0.01
TRIM4-201ENST00000349062 KLHDC7AQ5VTJ3 777 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 DAW1Q8N136 415 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 TRIM58Q8NG06 486 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 DNAJC12Q9UKB3 198 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 A0A1W2PQJ5 194 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 CCDC151A5D8V7 595 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 TBC1D12O60347 775 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 FECHP22830 423 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 GTF2A1P52655 376 aaPredicted RBP15.14■□□□□ 0.01
TRIM4-201ENST00000349062 EDRF1Q3B7T1 1238 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 SEZ6Q53EL9 994 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 TRAPPC11Q7Z392 1133 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 HAUS6Q7Z4H7 955 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 PPM1KQ8N3J5 372 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 KAT5Q92993 513 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 PPP1R16BQ96T49 567 aa15.14■□□□□ 0.01
TRIM4-201ENST00000349062 UBE2TQ9NPD8 197 aaPredicted RBP15.14■□□□□ 0.01
TRIM4-201ENST00000349062 GAP43P17677 238 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 RARRES1P49788 294 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 DRAP1Q14919 205 aaPredicted RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 TMEM132BQ14DG7 1078 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 ALKBH5Q6P6C2 394 aaKnown RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 SCYL3Q8IZE3 742 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 LPAR1Q92633 364 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 EXOC4Q96A65 974 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 FAM212AQ96EL1 285 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 PXMP2Q9NR77 195 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 TOPORSQ9NS56 1045 aaPredicted RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 FAM184BQ9ULE4 1060 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 EMSYQ7Z589 1322 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 KCNK3O14649 394 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 PAFAH1B1P43034 410 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 HIRAP54198 1017 aaPredicted RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 AMPD2Q01433 879 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 MYL7Q01449 175 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 MKRN4PQ13434 485 aaPredicted RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 EAPPQ56P03 285 aaPredicted RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 STXBP4Q6ZWJ1 553 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 SRLQ86TD4 932 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 ELP3Q9H9T3 547 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 DNAJC21Q5F1R6 531 aaKnown RBP15.13■□□□□ 0.01
TRIM4-201ENST00000349062 FKBP1CQ5VVH2 108 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 OSBPL9Q96SU4 736 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 LRRC1Q9BTT6 524 aa15.13■□□□□ 0.01
TRIM4-201ENST00000349062 ZSCAN5CA6NGD5 496 aaPredicted RBP15.12■□□□□ 0.01
TRIM4-201ENST00000349062 ATP8B1O43520 1251 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 FRMD5Q7Z6J6 570 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 GPATCH11Q8N954 259 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 TMEM143Q96AN5 459 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 TSGA10Q9BZW7 698 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 MYO1AQ9UBC5 1043 aa15.12■□□□□ 0.01
TRIM4-201ENST00000349062 TRAF3IP3Q9Y228 551 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms