RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 PTGER2P43116 358 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 MAPK7Q13164 816 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 C10orf76Q5T2E6 689 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 KCTD17Q8N5Z5 321 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 PROCA1Q8NCQ7 364 aaPredicted RBP16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 ZNRF3Q9ULT6 936 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 NFU1Q9UMS0 254 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 CEP104O60308 925 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 TBC1D12O60347 775 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 H2AFZP0C0S5 128 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 ABCB4P21439 1286 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 EPHB4P54760 987 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 MYL7Q01449 175 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 CXCL9Q07325 125 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 ITGB3BPQ13352 177 aaPredicted RBP16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 RASA3Q14644 834 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 MUM1L1Q5H9M0 696 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 H2AFVQ71UI9 128 aa16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 INTS2Q9H0H0 1204 aaKnown RBP16.22■□□□□ 0.19
VIPAS39-202ENST00000343765 GTPBP10A4D1E9 387 aaKnown RBP16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 KIF4AO95239 1232 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 FERP16591 822 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 SOX5P35711 763 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 HSD17B4P51659 736 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 TRADDQ15628 312 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 B3GNT9Q6UX72 402 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 LEKR1Q6ZMV7 388 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 LNX1Q8TBB1 728 aaPredicted RBP16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 CLEC4DQ8WXI8 215 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 RIT2Q99578 217 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 RNF14Q9UBS8 474 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 PLA2G6O60733 806 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 EGFRP00533 1210 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 MYCLP12524 364 aaPredicted RBP16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 KCNA3P22001 575 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 GUCY2CP25092 1073 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 GUCY2FP51841 1108 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 DLG4P78352 724 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 AEBP2Q6ZN18 517 aaPredicted RBP16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 FAM83AQ86UY5 434 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 TPCN2Q8NHX9 752 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 CCDC43Q96MW1 224 aaKnown RBP16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 CAMKK2Q96RR4 588 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 AP1M1Q9BXS5 423 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 FBXL5Q9UKA1 691 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 ZHX2Q9Y6X8 837 aa16.21■□□□□ 0.19
VIPAS39-202ENST00000343765 FAM153BP0C7A2 387 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 TKFCQ3LXA3 575 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 FAM153CQ494X1 144 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 DAAM2Q86T65 1068 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 IFT20Q8IY31 132 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 LRRC57Q8N9N7 239 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 USP38Q8NB14 1042 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 MKNK1Q9BUB5 465 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 FAM153AQ9UHL3 310 aa16.21■□□□□ 0.18
VIPAS39-202ENST00000343765 TNS1Q9HBL0 1735 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 RBBP6Q7Z6E9 1792 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 BTNL10A8MVZ5 291 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 ACTN2P35609 894 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 GALCP54803 685 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 MRPS9P82933 396 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 BFSP1Q12934 665 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 MTMR1Q13613 665 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 TNIP1Q15025 636 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 IFI16Q16666 785 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 PEX26Q7Z412 305 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 PRPF38AQ8NAV1 312 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 ZSWIM2Q8NEG5 633 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 OSGEPQ9NPF4 335 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 GPRC5CQ9NQ84 441 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 DMAC2Q9NW81 257 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 KCND2Q9NZV8 630 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 RAD51CO43502 376 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 P4HBP07237 508 aaKnown RBP16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 FKBP1CQ5VVH2 108 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 CBWD1Q9BRT8 395 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 STK33Q9BYT3 514 aa16.2■□□□□ 0.18
VIPAS39-202ENST00000343765 UBE4BO95155 1302 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 DHX15O43143 795 aaKnown RBP16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 MUTP22033 750 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 SPP2Q13103 211 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 GLE1Q53GS7 698 aaKnown RBP16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 EMBQ6PCB8 327 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 AGBL3Q8NEM8 1001 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 RUBCNQ92622 972 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 TAAR1Q96RJ0 339 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 GPR88Q9GZN0 384 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 AGO4Q9HCK5 861 aaKnown RBP16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 APEX2Q9UBZ4 518 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 PGAP2Q9UHJ9 254 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 GOLGA6CA6NDK9 693 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 GOLGA6DP0CG33 693 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 NFIL3Q16649 462 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 UGCGQ16739 394 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 SKIDA1Q1XH10 827 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 TAF3Q5VWG9 929 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 METTL13Q8N6R0 699 aa16.19■□□□□ 0.18
VIPAS39-202ENST00000343765 GOLGA5Q8TBA6 731 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms