RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 AKAP3O75969 853 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 GNA14O95837 355 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 NPTX2P47972 431 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 CCDC40Q4G0X9 1142 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 HAUS6Q7Z4H7 955 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 DPP9Q86TI2 863 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 TMEM161BQ8NDZ6 487 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 KIFAP3Q92845 792 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 BORCS6Q96GS4 357 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 SPATA33Q96N06 139 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 ATP6V0A4Q9HBG4 840 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 AGPAT3Q9NRZ7 376 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 ADGRA3Q8IWK6 1321 aa18.87■□□□□ 0.61
FRMD4A-202ENST00000342409 TISP43B9A030 160 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 TLR2O60603 784 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 ALCAMQ13740 583 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 EMC2Q15006 297 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 FAM160B1Q5W0V3 765 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 STXBP4Q6ZWJ1 553 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 PPFIBP1Q86W92 1011 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 CCDC155Q8N6L0 562 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 MCPH1Q8NEM0 835 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 SPIRE2Q8WWL2 714 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 NTPCRQ9BSD7 190 aaKnown RBP18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 KIFC3Q9BVG8 833 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 ECM2O94769 699 aaPredicted RBP18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 FECHP22830 423 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 ADCYAP1R1P41586 468 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 INHBEP58166 350 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 RTP1P59025 263 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 SMC1BQ8NDV3 1235 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 USP6NLQ92738 828 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 PANX2Q96RD6 677 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 TINF2Q9BSI4 451 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 GBP3Q9H0R5 595 aa18.86■□□□□ 0.61
FRMD4A-202ENST00000342409 EMSYQ7Z589 1322 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 TTC26A0AVF1 554 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 USP27XA6NNY8 438 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 ZBTB42B2RXF5 422 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 SLC16A3O15427 465 aaKnown RBP18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 TPM2P07951 284 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 KCNMA1Q12791 1236 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 PLPPR4Q7Z2D5 763 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 FRMD5Q7Z6J6 570 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 CCDC112Q8NEF3 446 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 CCDC102AQ96A19 550 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 ACCSQ96QU6 501 aa18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 POLR3FQ9H1D9 316 aaPredicted RBP18.85■□□□□ 0.61
FRMD4A-202ENST00000342409 ADCY6O43306 1168 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 TM4SF4P48230 202 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 MAP2K5Q13163 448 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 CRHR2Q13324 411 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 TRIM14Q14142 442 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 PLCB4Q15147 1175 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 E4F1Q66K89 784 aaPredicted RBP18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 SLC9A9Q8IVB4 645 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 ASAP3Q8TDY4 903 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 C17orf75Q9HAS0 396 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 KCND1Q9NSA2 647 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 FLRT1Q9NZU1 646 aa18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 ABT1Q9ULW3 272 aaKnown RBP18.84■□□□□ 0.61
FRMD4A-202ENST00000342409 TMEM88BA6NKF7 163 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 NOP56O00567 594 aaKnown RBP18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 EPHB6O15197 1021 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 RPL13P26373 211 aaKnown RBP18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 CTGFP29279 349 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 ARL2P36404 184 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 KCNJ6P48051 423 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 POLGP54098 1239 aaPredicted RBP18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 TAS1R3Q7RTX0 852 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 TMEM174Q8WUU8 243 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 TMEM143Q96AN5 459 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 HHIPL1Q96JK4 782 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 BAG1Q99933 345 aaPredicted RBP18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 NRBP2Q9NSY0 501 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 CAPN11Q9UMQ6 739 aa18.83■□□□□ 0.61
FRMD4A-202ENST00000342409 CCDC169A6NNP5 214 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 HOXC6P09630 235 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 MARK3P27448 753 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 DMP1Q13316 513 aaPredicted RBP18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 FKBP15Q5T1M5 1219 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 HS2ST1Q7LGA3 356 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 CNGA4Q8IV77 575 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 C12orf56Q8IXR9 622 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 ATP8B4Q8TF62 1192 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 EMID1Q96A84 441 aaPredicted RBP18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 AZI2Q9H6S1 392 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 KMT5AQ9NQR1 393 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 ARMCX3Q9UH62 379 aaPredicted RBP18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 TBX20Q9UMR3 447 aa18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.83■□□□□ 0.6
FRMD4A-202ENST00000342409 STX10O60499 249 aa18.82■□□□□ 0.6
FRMD4A-202ENST00000342409 GH1P01241 217 aa18.82■□□□□ 0.6
FRMD4A-202ENST00000342409 IGHA2P01877 340 aa18.82■□□□□ 0.6
FRMD4A-202ENST00000342409 SMPD1P17405 629 aa18.82■□□□□ 0.6
FRMD4A-202ENST00000342409 GLRA2P23416 452 aa18.82■□□□□ 0.6
FRMD4A-202ENST00000342409 CYP2J2P51589 502 aa18.82■□□□□ 0.6
FRMD4A-202ENST00000342409 ACVR2BQ13705 512 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms