RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 SPOPLQ6IQ16 392 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 DDX53Q86TM3 631 aaKnown RBP13.54□□□□□ -0.24
XIRP1-201ENST00000340369 DEPDC1BQ8WUY9 529 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 CALN1Q9BXU9 219 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 STK17AQ9UEE5 414 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 NMT2O60551 498 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 PFDN1O60925 122 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 E2F5Q15329 346 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 DEFB128Q7Z7B8 93 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 PIGOQ8TEQ8 1089 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 UBE2TQ9NPD8 197 aaPredicted RBP13.54□□□□□ -0.24
XIRP1-201ENST00000340369 CLASP1Q7Z460 1538 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 WDR91A4D1P6 747 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 LAD1O00515 517 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 RAG1P15918 1043 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 ABCD1P33897 745 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 RWDD4Q6NW29 188 aaKnown RBP13.54□□□□□ -0.24
XIRP1-201ENST00000340369 TMEM47Q9BQJ4 181 aa13.54□□□□□ -0.24
XIRP1-201ENST00000340369 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
XIRP1-201ENST00000340369 MT-ND3P03897 115 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CPT1AP50416 773 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 EPHB4P54760 987 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 IER5Q5VY09 327 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CDC42EP5Q6NZY7 148 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 AKR1B1P15121 316 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 NCF2P19878 526 aaPredicted RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 DNAJC24Q6P3W2 148 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 LDHDQ86WU2 507 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CHAMP1Q96JM3 812 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 FAM8A1Q9UBU6 413 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 PCDHA5Q9Y5H7 936 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 SFI1A8K8P3 1242 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 FDX1P10109 184 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 EEF1B2P24534 225 aaKnown RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 ZBTB41Q5SVQ8 909 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 KCNV1Q6PIU1 500 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 ZNF589Q86UQ0 364 aaPredicted RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 LCA5Q86VQ0 697 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 RABGGTAQ92696 567 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 TTC25Q96NG3 672 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 DRC3Q9H069 523 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 GCNT4Q9P109 453 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CEP152O94986 1710 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CLDN3O15551 220 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 PLEKHH3Q7Z736 793 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 DHTKD1Q96HY7 919 aaPredicted RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 TTC1Q99614 292 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CUEDC2Q9H467 287 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 AAASQ9NRG9 546 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 CEP170BQ9Y4F5 1589 aaPredicted RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 PGRMC1O00264 195 aaKnown RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 C2CD2LO14523 706 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 PPP6R2O75170 966 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 SOX5P35711 763 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 ART3Q13508 389 aa13.53□□□□□ -0.24
XIRP1-201ENST00000340369 ALKBH8Q96BT7 664 aaKnown RBP13.53□□□□□ -0.24
XIRP1-201ENST00000340369 MED7O43513 233 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 RPS6KA5O75582 802 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 CYP27A1Q02318 531 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 SURF1Q15526 300 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 PAN2Q504Q3 1202 aaKnown RBP13.52□□□□□ -0.24
XIRP1-201ENST00000340369 PIP4K2CQ8TBX8 421 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 FAM151AQ8WW52 585 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.24
XIRP1-201ENST00000340369 SUCLA2Q9P2R7 463 aaPredicted RBP13.52□□□□□ -0.24
XIRP1-201ENST00000340369 RGS12O14924 1447 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 CDC25BP30305 580 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 APOA5Q6Q788 366 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 CYFIP1Q7L576 1253 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 PCGF5Q86SE9 256 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.52□□□□□ -0.24
XIRP1-201ENST00000340369 GSDMAQ96QA5 445 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 ISCA1Q9BUE6 129 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 FOXP1Q9H334 677 aaPredicted RBP13.52□□□□□ -0.24
XIRP1-201ENST00000340369 STARD7Q9NQZ5 370 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 DYRK4Q9NR20 520 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 INTUQ9ULD6 942 aa13.52□□□□□ -0.24
XIRP1-201ENST00000340369 MANSC4A6NHS7 340 aaPredicted RBP13.52□□□□□ -0.25
XIRP1-201ENST00000340369 NBPF26B4DH59 902 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 CFLARO15519 480 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 MAP3K7O43318 606 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.25
XIRP1-201ENST00000340369 SLC25A27O95847 323 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.25
XIRP1-201ENST00000340369 NBPF15Q8N660 670 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 RNF26Q9BY78 433 aaPredicted RBP13.52□□□□□ -0.25
XIRP1-201ENST00000340369 TBC1D22BQ9NU19 505 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 JRKLQ9Y4A0 524 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 SLC4A7Q9Y6M7 1214 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 GGPS1O95749 300 aa13.52□□□□□ -0.25
XIRP1-201ENST00000340369 NFKBIAP25963 317 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms