RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 GTF2BQ00403 316 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 EMC2Q15006 297 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 FAM160B1Q5W0V3 765 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 HAUS6Q7Z4H7 955 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 MCPH1Q8NEM0 835 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 KIFAP3Q92845 792 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 ERGIC2Q96RQ1 377 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 KIFC3Q9BVG8 833 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 AGPAT3Q9NRZ7 376 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 MGAMO43451 1857 aa23.31■■□□□ 1.32
VRK2-201ENST00000340157 AKR1B15C9JRZ8 316 aaPredicted RBP23.3■■□□□ 1.32
VRK2-201ENST00000340157 NOP56O00567 594 aaKnown RBP23.3■■□□□ 1.32
VRK2-201ENST00000340157 MFAP3LO75121 409 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 ADCYAP1R1P41586 468 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 SYCP1Q15431 976 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 PPFIBP1Q86W92 1011 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 TMEM161BQ8NDZ6 487 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 TINF2Q9BSI4 451 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 GBP3Q9H0R5 595 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 SPTLC3Q9NUV7 552 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.3■■□□□ 1.321e-7■■□□□ 12.2
VRK2-201ENST00000340157 EMSYQ7Z589 1322 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 ADGRA3Q8IWK6 1321 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 SIP14410 1827 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.3■■□□□ 1.32
VRK2-201ENST00000340157 TMEM88BA6NKF7 163 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 CRHR2Q13324 411 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 ALCAMQ13740 583 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 NOLC1Q14978 699 aaKnown RBP eCLIP23.3■■□□□ 1.32
VRK2-201ENST00000340157 DMAC2Q9NW81 257 aa23.3■■□□□ 1.32
VRK2-201ENST00000340157 ZSWIM8A7E2V4 1837 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 TISP43B9A030 160 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 RTP1P59025 263 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 SPIRE2Q8WWL2 714 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 NTPCRQ9BSD7 190 aaKnown RBP23.29■■□□□ 1.32
VRK2-201ENST00000340157 TTYH3Q9C0H2 523 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 POLR3FQ9H1D9 316 aaPredicted RBP23.29■■□□□ 1.32
VRK2-201ENST00000340157 C17orf75Q9HAS0 396 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 SIK3Q9Y2K2 1263 aa23.29■■□□□ 1.32
VRK2-201ENST00000340157 RPL13P26373 211 aaKnown RBP23.28■■□□□ 1.32
VRK2-201ENST00000340157 MARK3P27448 753 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 TM4SF4P48230 202 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 POLGP54098 1239 aaPredicted RBP23.28■■□□□ 1.32
VRK2-201ENST00000340157 DMP1Q13316 513 aaPredicted RBP23.28■■□□□ 1.32
VRK2-201ENST00000340157 PLPPR4Q7Z2D5 763 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 CCDC155Q8N6L0 562 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 BORCS6Q96GS4 357 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 HHIPL1Q96JK4 782 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 AZI2Q9H6S1 392 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 PCNTO95613 3336 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 ZBTB42B2RXF5 422 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 SREBF2Q12772 1141 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 MAP2K5Q13163 448 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 TRIM14Q14142 442 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 FRMD5Q7Z6J6 570 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 CCDC112Q8NEF3 446 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 USP6NLQ92738 828 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 GLG1Q92896 1179 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 ACCSQ96QU6 501 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 PANX2Q96RD6 677 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 FLRT1Q9NZU1 646 aa23.28■■□□□ 1.32
VRK2-201ENST00000340157 TTC26A0AVF1 554 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 CCDC169A6NNP5 214 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 SLC16A3O15427 465 aaKnown RBP23.27■■□□□ 1.32
VRK2-201ENST00000340157 FKBP15Q5T1M5 1219 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 HS2ST1Q7LGA3 356 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 TMEM143Q96AN5 459 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 ZFYVE28Q9HCC9 887 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 KMT5AQ9NQR1 393 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 NRBP2Q9NSY0 501 aa23.27■■□□□ 1.32
VRK2-201ENST00000340157 ADCY6O43306 1168 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 LAMC2Q13753 1193 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 PLCB4Q15147 1175 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 SYCP3Q8IZU3 236 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 SLC17A8Q8NDX2 589 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 BBXQ8WY36 941 aaPredicted RBP23.26■■□□□ 1.31
VRK2-201ENST00000340157 EMID1Q96A84 441 aaPredicted RBP23.26■■□□□ 1.31
VRK2-201ENST00000340157 BAG1Q99933 345 aaPredicted RBP23.26■■□□□ 1.31
VRK2-201ENST00000340157 TMEM206Q9H813 350 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.26■■□□□ 1.31
VRK2-201ENST00000340157 USP27XA6NNY8 438 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 GH1P01241 217 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 HOXC6P09630 235 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 SMPD1P17405 629 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 CTGFP29279 349 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 ARL2P36404 184 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 ACVR2BQ13705 512 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 CYP4F22Q6NT55 531 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 SLC9A9Q8IVB4 645 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 ASAP3Q8TDY4 903 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 ATP8B4Q8TF62 1192 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 FAM167AQ96KS9 214 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 ABHD16BQ9H3Z7 469 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 ARMCX3Q9UH62 379 aaPredicted RBP23.26■■□□□ 1.31
VRK2-201ENST00000340157 TBX20Q9UMR3 447 aa23.26■■□□□ 1.31
VRK2-201ENST00000340157 DENND3A2RUS2 1198 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 EPHB6O15197 1021 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 FECHP22830 423 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 RFC5P40937 340 aa23.25■■□□□ 1.31
VRK2-201ENST00000340157 CYP2J2P51589 502 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms